Volume 7; Issue 2

Environmental Microbiology Reports

Volume 7; Issue 2

1

The importance of lizards and small mammals as reservoirs for B orrelia lusitaniae in Portugal

Norte, Ana Cláudia, Alves da Silva, António, Alves, Joana, da Silva, Luís Pascoal, Núncio, M. Sofia, Escudero, Raquel, Anda, Pedro, Ramos, Jaime A., Lopes de Carvalho, Isabel

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 243 KB

english, 2015

2

Tle distribution and diversity in metagenomic datasets reveal niche specialization

Egan, Frank, Reen, F. Jerry, O'Gara, Fergal

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 948 KB

english, 2015

3

Cable bacteria associated with long-distance electron transport in New England salt marsh sediment

Larsen, Steffen, Nielsen, Lars Peter, Schramm, Andreas

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 558 KB

english, 2015

4

Diversity of small RNAs expressed in P seudomonas species

Gómez-Lozano, María, Marvig, Rasmus L., Molina-Santiago, Carlos, Tribelli, Paula M., Ramos, Juan-Luis, Molin, Søren

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 1.75 MB

english, 2015

5

Re-appraisal of the phylogeny and fluorescence in situ hybridization probes for the analysis of the C ompetibacteraceae in wastewater treatment systems

McIlroy, Simon J., Nittami, Tadashi, Kanai, Eri, Fukuda, Junji, Saunders, Aaron M., Nielsen, Per Halkjaer

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 2.09 MB

english, 2015

6

Evaluation of revised polymerase chain reaction primers for more inclusive quantification of ammonia-oxidizing archaea and bacteria

Meinhardt, Kelley A., Bertagnolli, Anthony, Pannu, Manmeet W., Strand, Stuart E., Brown, Sally L., Stahl, David A.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 758 KB

english, 2015

7

Symbiotic bacteria contribute to increasing the population size of a freshwater crustacean, D aphnia magna

Peerakietkhajorn, Saranya, Tsukada, Koji, Kato, Yasuhiko, Matsuura, Tomoaki, Watanabe, Hajime

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 1.44 MB

english, 2015

8

Quorum sensing restrains growth and is rapidly inactivated during domestication of S inorhizobium meliloti

Charoenpanich, Pornsri, Soto, Maria J., Becker, Anke, McIntosh, Matthew

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 990 KB

english, 2015

9

Phylogenomic evaluation of members above the species level within the phylum F irmicutes based on conserved proteins

Zhang, Weiwei, Lu, Zhitang

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 511 KB

english, 2015

10

Draft whole-genome sequence of the antibiotic-producing soil isolate P seudomonas sp. strain 250J

Molina-Santiago, Carlos, Udaondo, Zulema, Ramos, Juan-Luis

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 979 KB

english, 2015

11

The exopolysaccharide Psl-eDNA interaction enables the formation of a biofilm skeleton in P seudomonas aeruginosa

Wang, Shiwei, Liu, Xi, Liu, Hongsheng, Zhang, Li, Guo, Yuan, Yu, Shan, Wozniak, Daniel J., Ma, Luyan Z.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 1.33 MB

english, 2015

12

Low frequency of endospore-specific genes in subseafloor sedimentary metagenomes

Kawai, Mikihiko, Uchiyama, Ikuo, Takami, Hideto, Inagaki, Fumio

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 1.44 MB

english, 2015

13

Contribution of RpoS to metabolic efficiency and ectoines synthesis during the osmo- and heat-stress response in the halophilic bacterium C hromohalobacter salexigens

Salvador, Manuel, Argandoña, Montserrat, Pastor, Jose M., Bernal, Vicente, Cánovas, Manuel, Csonka, Laszlo N., Nieto, Joaquín J., Vargas, Carmen

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 1.08 MB

english, 2015

14

Temporal dynamics of active A rchaea in oxygen-depleted zones of two deep lakes

Hugoni, Mylène, Domaizon, Isabelle, Taib, Najwa, Biderre-Petit, Corinne, Agogué, Hélène, Galand, Pierre E., Debroas, Didier, Mary, Isabelle

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 595 KB

english, 2015

15

A putative greigite-type magnetosome gene cluster from the candidate phylum L atescibacteria

Lin, Wei, Pan, Yongxin

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 361 KB

english, 2015

16

Influence of edaphic and management factors on the diversity and abundance of ammonia-oxidizing thaumarchaeota and bacteria in soils of bioenergy crop cultivars

Bertagnolli, Anthony D., Meinhardt, Kelley A., Pannu, Manmeet, Brown, Sally, Strand, Stuart, Fransen, Steven C., Stahl, David A.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 1.45 MB

english, 2015

17

Dissolved organic monomer partitioning among bacterial groups in two oligotrophic lakes

Pérez, María Teresa, Rofner, Carina, Sommaruga, Ruben

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 361 KB

english, 2015

18

Issue Information

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 585 KB

english, 2015

19

A severe reduction in the cytochrome C content of G eobacter sulfurreducens eliminates its capacity for extracellular electron transfer

Estevez-Canales, Marta, Kuzume, Akiyoshi, Borjas, Zulema, Füeg, Michael, Lovley, Derek, Wandlowski, Thomas, Esteve-Núñez, Abraham

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 311 KB

english, 2015

20

Intact preservation of environmental samples by freezing under an alternating magnetic field

Morono, Yuki, Terada, Takeshi, Yamamoto, Yuhji, Xiao, Nan, Hirose, Takehiro, Sugeno, Masaya, Ohwada, Norio, Inagaki, Fumio

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 873 KB

english, 2015

21

Ultra-high-sensitivity stable-isotope probing of rRNA by high-throughput sequencing of isopycnic centrifugation gradients

Aoyagi, Tomo, Hanada, Satoshi, Itoh, Hideomi, Sato, Yuya, Ogata, Atsushi, Friedrich, Michael W., Kikuchi, Yoshitomo, Hori, Tomoyuki

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 298 KB

english, 2015

22

Different bulk and active bacterial communities in cryoconite from the margin and interior of the Greenland ice sheet

Stibal, Marek, Schostag, Morten, Cameron, Karen A., Hansen, Lars H., Chandler, David M., Wadham, Jemma L., Jacobsen, Carsten S.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 289 KB

english, 2015

23

First report of a multidrug-resistant K lebsiella pneumoniae of sequence type 11 causing sepsis in a free-ranging beaver ( C astor fiber )

Pilo, Paola, Vogt, Debora, Origgi, Francesco C., Endimiani, Andrea, Peterson, Susanne, Perreten, Vincent

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 76 KB

english, 2015

24

Cell-specific CO 2 fixation rates of two distinct groups of plastidic protists in the Atlantic Ocean remain unchanged after nutrient addition

Grob, Carolina, Jardillier, Ludwig, Hartmann, Manuela, Ostrowski, Martin, Zubkov, Mikhail V., Scanlan, David J.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 377 KB

english, 2015

25

Single amino acid substitution in homogentisate 1,2-dioxygenase is responsible for pigmentation in a subset of B urkholderia cepacia complex isolates

Gonyar, Laura A., Fankhauser, Sarah C., Goldberg, Joanna B.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 607 KB

english, 2015

26

Hydrogen and electron transfer between microorganisms

Wackett, Lawrence P.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 67 KB

english, 2015

27

Genomic distribution of B-vitamin auxotrophy and uptake transporters in environmental bacteria from the C hloroflexi phylum

Rodionova, Irina A., Li, Xiaoqing, Plymale, Andrew E., Motamedchaboki, Khatereh, Konopka, Allan E., Romine, Margaret F., Fredrickson, James K., Osterman, Andrei L., Rodionov, Dmitry A.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 270 KB

english, 2015

28

In situ expression of nitrite-dependent anaerobic methane oxidation proteins by Candidatus Methylomirabilis oxyfera co-occurring with expressed anammox proteins in a contaminated aquifer

Hanson, Buck T., Madsen, Eugene L.

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 172 KB

english, 2015

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