Volume 90; Issue 3

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FEMS Microbiology Ecology
Volume 90; Issue 3

FEMS Microbiology Ecology

Volume 90; Issue 3

1

Contrasting diversity of epibiotic bacteria and surrounding bacterioplankton of a common submerged macrophyte, Potamogeton crispus , in freshwater lakes

He, Dan, Ren, Lijuan, Wu, Qinglong L.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 647 KB

english, 2014

2

Soil type-dependent effects of a potential biocontrol inoculant on indigenous bacterial communities in the rhizosphere of field-grown lettuce

Schreiter, Susanne, Ding, Guo-Chun, Grosch, Rita, Kropf, Siegfried, Antweiler, Kai, Smalla, Kornelia

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 503 KB

english, 2014

3

A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses

Buttigieg, Pier Luigi, Ramette, Alban

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 353 KB

english, 2014

4

Artificial soil studies reveal domain-specific preferences of microorganisms for the colonisation of different soil minerals and particle size fractions

Hemkemeyer, Michael, Pronk, Geertje J., Heister, Katja, Kögel-Knabner, Ingrid, Martens, Rainer, Tebbe, Christoph C.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 339 KB

english, 2014

5

Off-site impacts of agricultural composting: role of terrestrially derived organic matter in structuring aquatic microbial communities and their metabolic potential

Pommier, Thomas, Merroune, Asmaa, Bettarel, Yvan, Got, Patrice, Janeau, Jean-Louis, Jouquet, Pascal, Thu, Thuy D., Toan, Tran D., Rochelle-Newall, Emma

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 344 KB

english, 2014

6

Study of methanogen communities associated with different rumen protozoal populations

Belanche, Alejandro, de la Fuente, Gabriel, Newbold, Charles J.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 1.60 MB

english, 2014

7

Diazotrophic potential among bacterial communities associated with wild and cultivated Agave species

Desgarennes, Damaris, Garrido, Etzel, Torres-Gomez, Miryam J., Peña-Cabriales, Juan J., Partida-Martinez, Laila P.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 589 KB

english, 2014

8

GeoChip-based insights into the microbial functional gene repertoire of marine sponges (high microbial abundance, low microbial abundance) and seawater

Bayer, Kristina, Moitinho-Silva, Lucas, Brümmer, Franz, Cannistraci, Carlo V., Ravasi, Timothy, Hentschel, Ute

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 630 KB

english, 2014

9

Halophyte plant colonization as a driver of the composition of bacterial communities in salt marshes chronically exposed to oil hydrocarbons

Oliveira, Vanessa, Gomes, Newton C.M., Cleary, Daniel F.R., Almeida, Adelaide, Silva, Artur M.S., Simões, Mário M.Q., Silva, Helena, Cunha, Ângela

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 857 KB

english, 2014

10

Impact of lifestyle on the gut microbiota of healthy infants and their mothers - the ALADDIN birth cohort

Hesla, Helena M., Stenius, Fredrik, Jäderlund, Lotta, Nelson, Ronald, Engstrand, Lars, Alm, Johan, Dicksved, Johan

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 352 KB

english, 2014

11

The catecholamine stress hormones norepinephrine and dopamine increase the virulence of pathogenic Vibrio anguillarum and Vibrio campbellii

Pande, Gde Sasmita J., Suong, Nguyen Thao, Bossier, Peter, Defoirdt, Tom

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 296 KB

english, 2014

12

Exploring new roles for the rpoS gene in the survival and virulence of the fire blight pathogen Erwinia amylovora

Santander, Ricardo D., Monte-Serrano, Mercedes, Rodríguez-Herva, José J., López-Solanilla, Emilia, Rodríguez-Palenzuela, Pablo, Biosca, Elena G.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 662 KB

english, 2014

13

The marine bacterium Marinobacter hydrocarbonoclasticus SP17 degrades a wide range of lipids and hydrocarbons through the formation of oleolytic biofilms with distinct gene expression profiles

Mounier, Julie, Camus, Arantxa, Mitteau, Isabelle, Vaysse, Pierre-Joseph, Goulas, Philippe, Grimaud, Régis, Sivadon, Pierre

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 1.18 MB

english, 2014

14

Sulfate reduction and sulfide oxidation in extremely steep salinity gradients formed by freshwater springs emerging into the Dead Sea

Häusler, Stefan, Weber, Miriam, Siebert, Christian, Holtappels, Moritz, Noriega-Ortega, Beatriz E., De Beer, Dirk, Ionescu, Danny

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 1.01 MB

english, 2014

15

Epifluorescence, SEM, TEM and nanoSIMS image analysis of the cold phenotype of Clostridium psychrophilum at subzero temperatures

Perfumo, Amedea, Elsaesser, Andreas, Littmann, Sten, Foster, Rachel A., Kuypers, Marcel M.M., Cockell, Charles S., Kminek, Gerhard

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 1.97 MB

english, 2014

16

Diversity and geochemical structuring of bacterial communities along a salinity gradient in a carbonate aquifer subject to seawater intrusion

Héry, Marina, Volant, Aurélie, Garing, Charlotte, Luquot, Linda, Elbaz Poulichet, Françoise, Gouze, Philippe

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 483 KB

english, 2014

17

Temporal changes and the effect of subtherapeutic concentrations of antibiotics in the gut microbiota of swine

Holman, Devin B., Chénier, Martin R.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 500 KB

english, 2014

18

Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types

Urbanová, Zuzana, Bárta, Jiří

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 400 KB

english, 2014

19

Anthropogenic land use shapes the composition and phylogenetic structure of soil arbuscular mycorrhizal fungal communities

Moora, Mari, Davison, John, Öpik, Maarja, Metsis, Madis, Saks, Ülle, Jairus, Teele, Vasar, Martti, Zobel, Martin

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 590 KB

english, 2014

20

Phylogenetic and clonality analysis of Bacillus pumilus isolates uncovered a highly heterogeneous population of different closely related species and clones

Branquinho, Raquel, Meirinhos-Soares, Luís, Carriço, João A., Pintado, Manuela, Peixe, Luísa V.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 1.27 MB

english, 2014

21

Symbiotic archaea in marine sponges show stability and host specificity in community structure and ammonia oxidation functionality

Zhang, Fan, Pita, Lucía, Erwin, Patrick M., Abaid, Summara, López-Legentil, Susanna, Hill, Russell T.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 299 KB

english, 2014

22

Unique and shared responses of the gut microbiota to prolonged fasting: a comparative study across five classes of vertebrate hosts

Kohl, Kevin D., Amaya, James, Passement, Celeste A., Dearing, M. Denise, McCue, Marshall D.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 596 KB

english, 2014

23

A high-throughput sequencing ecotoxicology study of freshwater bacterial communities and their responses to tebuconazole

Pascault, Noémie, Roux, Simon, Artigas, Joan, Pesce, Stéphane, Leloup, Julie, Tadonleke, Rémy D., Debroas, Didier, Bouchez, Agnès, Humbert, Jean-François

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 836 KB

english, 2014

24

In-depth analyses of deep subsurface sediments using 454-pyrosequencing reveals a reservoir of buried fungal communities at record-breaking depths

Rédou, Vanessa, Ciobanu, Maria Cristina, Pachiadaki, Maria G., Edgcomb, Virginia, Alain, Karine, Barbier, Georges, Burgaud, Gaëtan

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 795 KB

english, 2014

25

Acetoclastic methane formation from Eucalyptus detritus in pristine hydrocarbon-rich river sediments by Methanosarcinales

Beckmann, Sabrina, Manefield, Mike

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 741 KB

english, 2014

26

Identification and activity of acetate-assimilating bacteria in diffuse fluids venting from two deep-sea hydrothermal systems

Winkel, Matthias, Pjevac, Petra, Kleiner, Manuel, Littmann, Sten, Meyerdierks, Anke, Amann, Rudolf, Mußmann, Marc

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 1.72 MB

english, 2014

27

Windrow composting mitigated CH 4 emissions: characterization of methanogenic and methanotrophic communities in manure management

Chen, Ruirui, Wang, Yiming, Wei, Shiping, Wang, Wei, Lin, Xiangui

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 347 KB

english, 2014

28

Integrated ‘omics analysis for studying the microbial community response to a pH perturbation of a cellulose-degrading bioreactor culture

Boaro, Amy A., Kim, Young-Mo, Konopka, Allan E., Callister, Stephen J., Ahring, Birgitte K.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 908 KB

english, 2014

29

Chemolithotrophic growth of the aerobic hyperthermophilic bacterium Thermocrinis ruber OC 14/7/2 on monothioarsenate and arsenite

Härtig, Cornelia, Lohmayer, Regina, Kolb, Steffen, Horn, Marcus A., Inskeep, William P., Planer-Friedrich, Britta

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 418 KB

english, 2014

30

Symbiotic Chlorella variabilis incubated under constant dark conditions for 24 hours loses the ability to avoid digestion by host lysosomal enzymes in digestive vacuoles of host ciliate Paramecium bursaria

Kodama, Yuuki, Fujishima, Masahiro

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 911 KB

english, 2014

31

Issue Information

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 57 KB

english, 2014

32

The bacterial microbiota of Stolotermes ruficeps ( Stolotermitidae ), a phylogenetically basal termite endemic to New Zealand

Reid, Nicola M., Addison, Sarah L., West, Mark A., Lloyd-Jones, Gareth

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 263 KB

english, 2014

33

Conversion of phenyl methyl ethers by Desulfitobacterium spp. and screening for the genes involved

Mingo, Felix S., Studenik, Sandra, Diekert, Gabriele

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 419 KB

english, 2014

34

Transformation of monothioarsenate by haloalkaliphilic, anoxygenic photosynthetic purple sulfur bacteria

Edwardson, Christian F., Planer-Friedrich, Britta, Hollibaugh, James T.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 578 KB

english, 2014

35

Culturable fungal assemblages growing within Cenococcum sclerotia in forest soils

Obase, Keisuke, Douhan, Greg W., Matsuda, Yosuke, Smith, Matthew E.

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 476 KB

english, 2014