Volume 10; Issue 4

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Volume 10; Issue 4

Genes

Volume 10; Issue 4

1

Assessing Global DNA Methylation Changes Associated with Plasticity in Seven Highly Inbred Lines of Snapdragon Plants (Antirrhinum majus)

Gourcilleau, Delphine, Mousset, Mathilde, Latutrie, Mathieu, Marin, Sara, Delaunay, Alain, Maury, Stéphane, Pujol, Benoît

Journal:

Year:

2019

File:

PDF, 382 KB

2019

2

The Transcriptome of Verticillium dahliae Responds Differentially Depending on the Disease Susceptibility Level of the Olive (Olea europaea L.) Cultivar

Jiménez-Ruiz, Jaime, Leyva-Pérez, María de la O, Gómez-Lama Cabanás, Carmen, Barroso, Juan B., Luque, Francisco, Mercado-Blanco, Jesús

Journal:

Year:

2019

File:

PDF, 3.81 MB

2019

3

Insights into the Link between the Organization of DNA Replication and the Mutational Landscape

Gaboriaud, Julia, Wu, Pei-Yun

Journal:

Year:

2019

File:

PDF, 881 KB

2019

4

Pharmacogenetics in the Treatment of Cardiovascular Diseases and Its Current Progress Regarding Implementation in the Clinical Routine

Dávila-Fajardo, Cristina Lucía, Díaz-Villamarín, Xando, Antúnez-Rodríguez, Alba, Fernández-Gómez, Ana Estefanía, García-Navas, Paloma, Martínez-González, Luis Javier, Dávila-Fajardo, José Augusto, Bar

Journal:

Year:

2019

File:

PDF, 479 KB

2019

5

DNA Methylation Reprogramming during Mammalian Development

Zeng, Yang, Chen, Taiping

Journal:

Year:

2019

Language:

english

File:

PDF, 1.10 MB

english, 2019

6

Assessing Global DNA Methylation Changes Associated with Plasticity in Seven Highly Inbred Lines of Snapdragon Plants (Antirrhinum majus)

Gourcilleau, Delphine, Mousset, Mathilde, Latutrie, Mathieu, Marin, Sara, Delaunay, Alain, Maury, Stéphane, Pujol, Benoît

Journal:

Year:

2019

Language:

english

File:

PDF, 382 KB

english, 2019

7

Fluorescent Light Incites a Conserved Immune and Inflammatory Genetic Response within Vertebrate Organs (Danio Rerio, Oryzias Latipes and Mus Musculus)

Boswell, Mikki, Lu, Yuan, Boswell, William, Savage, Markita, Hildreth, Kim, Salinas, Raquel, Walter, Christi A., Walter, Ronald B.

Journal:

Year:

2019

Language:

english

File:

PDF, 947 KB

english, 2019

8

Adeno-Associated Viral Vectors as a Tool for Large Gene Delivery to the Retina

Journal:

Year:

2019

Language:

english

File:

PDF, 655 KB

english, 2019

9

Bayes Factor-Based Regulatory Gene Network Analysis of Genome-Wide Association Study of Economic Traits in a Purebred Swine Population

Lee,, Kang,, Kim,

Journal:

Year:

2019

Language:

english

File:

PDF, 1.63 MB

english, 2019

10

Neural Ganglia Transcriptome and Peptidome Associated with Sexual Maturation in Female Pacific Abalone (Haliotis discus hannai)

Kim, Mi Ae, Markkandan, Kesavan, Han, Na-Young, Park, Jong-Moon, Lee, Jung Sick, Lee, Hookeun, Sohn, Young Chang

Journal:

Year:

2019

File:

PDF, 897 KB

2019

11

Correction of NR2E3 Associated Enhanced S-cone Syndrome Patient-specific iPSCs using CRISPR-Cas9

Bohrer, Laura, Wiley, Luke, Burnight, Erin, Cooke, Jessica, Giacalone, Joseph, Anfinson, Kristin, Andorf, Jeaneen, Mullins, Robert, Stone, Edwin, Tucker, Budd

Journal:

Year:

2019

File:

PDF, 11.64 MB

2019

12

Genetic Diversity and Population Structure Analysis of Dalbergia Odorifera Germplasm and Development of a Core Collection Using Microsatellite Markers

Liu, Fu-Mei, Zhang, Ning-Nan, Liu, Xiao-Jin, Yang, Zeng-Jiang, Jia, Hong-Yan, Xu, Da-Ping

Journal:

Year:

2019

File:

PDF, 2.05 MB

2019

13

Characterization and Transcriptome Studies of Autoinducer Synthase Gene from Multidrug Resistant Acinetobacter baumannii Strain 863

Ng, Chung-Kiat, How, Kah-Yan, Tee, Kok-Keng, Chan, Kok-Gan

Journal:

Year:

2019

File:

PDF, 947 KB

2019

14

The Primary Antisense Transcriptome of Halobacterium salinarum NRC-1

de Almeida, João Paulo Pereira, Vêncio, Ricardo Z. N., Lorenzetti, Alan P. R., Caten, Felipe ten-, Gomes-Filho, José Vicente, Koide, Tie

Journal:

Year:

2019

Language:

english

File:

PDF, 675 KB

english, 2019

15

Next-Generation Sequencing Enables Spatiotemporal Resolution of Human Centromere Replication Timing

Massey, Dashiell J., Kim, Dongsung, Brooks, Kayla E., Smolka, Marcus B., Koren, Amnon

Journal:

Year:

2019

Language:

english

File:

PDF, 4.50 MB

english, 2019

16

Host–MicroRNA–Microbiota Interactions in Colorectal Cancer

Yuan, Ce, Steer, Clifford J., Subramanian, Subbaya

Journal:

Year:

2019

Language:

english

File:

PDF, 823 KB

english, 2019

17

Delayed Feeding Alters Transcriptional and Post-Transcriptional Regulation of Hepatic Metabolic Pathways in Peri-Hatch Broiler Chicks

Hicks, Julie A., Porter, Tom E., Sunny, Nishanth E., Liu, Hsiao-Ching

Journal:

Year:

2019

Language:

english

File:

PDF, 1.08 MB

english, 2019

18

Uncovering Missing Heritability in Rare Diseases

Maroilley, Tatiana, Tarailo-Graovac, Maja

Journal:

Year:

2019

Language:

english

File:

PDF, 458 KB

english, 2019

19

FARMAPRICE: A Pharmacogenetic Clinical Decision Support System for Precise and Cost-Effective Therapy

Roncato, Rossana, Dal Cin, Lisa, Mezzalira, Silvia, Comello, Francesco, De Mattia, Elena, Bignucolo, Alessia, Giollo, Lorenzo, D’Errico, Simone, Gulotta, Antonio, Emili, Luca, Carbone, Vincenzo, Guard

Journal:

Year:

2019

Language:

english

File:

PDF, 1.14 MB

english, 2019

20

The Complex Interplay between Metabolic Reprogramming and Epigenetic Alterations in Renal Cell Carcinoma

Lameirinhas, Ana, Miranda-Gonçalves, Vera, Henrique, Rui, Jerónimo, Carmen

Journal:

Year:

2019

Language:

english

File:

PDF, 2.09 MB

english, 2019

21

An Integrated Analysis of Cashmere Fineness lncRNAs in Cashmere Goats

Zheng, Yuan Y., Sheng, Sheng D., Hui, Tai Y., Yue, Chang, Sun, Jia M., Guo, Dan, Guo, Su L., Li, Bo J., Xue, Hui L., Wang, Ze Y., Bai, Wen L.

Journal:

Year:

2019

Language:

english

File:

PDF, 4.57 MB

english, 2019

22

The Role and Regulation of Autophagy and the Proteasome During Aging and Senescence in Plants

Wang, Haojie, Schippers, Jos H.M.

Journal:

Year:

2019

Language:

english

File:

PDF, 2.04 MB

english, 2019

23

DNA Barcode Reveals the Bycatch of Endangered Batoids Species in the Southwest Atlantic: Implications for Sustainable Fisheries Management and Conservation Efforts

Ferrette, Bruno Lopes da Silva, Domingues, Rodrigo Rodrigues, Rotundo, Matheus Marcos, Miranda, Marina Provetti, Bunholi, Ingrid Vasconcellos, De Biasi, Juliana Beltramin, Oliveira, Claudio, Foresti,

Journal:

Year:

2019

Language:

english

File:

PDF, 1.34 MB

english, 2019

24

Identification and Characterization of Salt-Responsive MicroRNAs in Vicia faba by High-Throughput Sequencing

Alzahrani,, Alaraidh,, Khan,, Migdadi,, Alghamdi,, Alsahli,

Journal:

Year:

2019

Language:

english

File:

PDF, 1.14 MB

english, 2019

25

Fluorescent Light Incites a Conserved Immune and Inflammatory Genetic Response within Vertebrate Organs (Danio Rerio, Oryzias Latipes and Mus Musculus)

Boswell, Mikki, Lu, Yuan, Boswell, William, Savage, Markita, Hildreth, Kim, Salinas, Raquel, Walter, Christi A., Walter, Ronald B.

Journal:

Year:

2019

File:

PDF, 947 KB

2019

26

Analysis of DNA Methylation Patterns Associated with In Vitro Propagated Globe Artichoke Plants Using an EpiRADseq-Based Approach

Cerruti, Elisa, Comino, Cinzia, Acquadro, Alberto, Marconi, Gianpiero, Repetto, Anna Maria, Pisanu, Anna Barbara, Pilia, Roberto, Albertini, Emidio, Portis, Ezio

Journal:

Year:

2019

Language:

english

File:

PDF, 4.16 MB

english, 2019

27

Genomic Features, Comparative Genomic Analysis, and Antimicrobial Susceptibility Patterns of Chryseobacterium arthrosphaerae Strain ED882-96 Isolated in Taiwan

Liang, Chih-Yu, Yang, Chih-Hui, Lai, Chung-Hsu, Huang, Yi-Han, Lin, Jiun-Nong

Journal:

Year:

2019

Language:

english

File:

PDF, 5.04 MB

english, 2019

28

The Elaboration of miRNA Regulation and Gene Regulatory Networks in Plant–Microbe Interactions

de Vries,, de Vries,, Rose,

Journal:

Year:

2019

Language:

english

File:

PDF, 737 KB

english, 2019

29

A Novel Aquaporin 12-like Protein from Chilo suppressalis: Characterization and Functional Analysis

Lu, Ming-Xing, Song, Jie, Xu, Jing, Wang, Guirong, Liu, Yang, Du, Yu-Zhou

Journal:

Year:

2019

Language:

english

File:

PDF, 2.64 MB

english, 2019

30

Novel Molecular Signatures in the PIP4K/PIP5K Family of Proteins Specific for Different Isozymes and Subfamilies Provide Important Insights into the Evolutionary Divergence of this Protein Family

Khadka, Bijendra, Gupta, Radhey S.

Journal:

Year:

2019

Language:

english

File:

PDF, 8.74 MB

english, 2019

31

miR-194 Accelerates Apoptosis of Aβ1–42-Transduced Hippocampal Neurons by Inhibiting Nrn1 and Decreasing PI3K/Akt Signaling Pathway Activity

Wang, Tingting, Cheng, Yaling, Han, Haibin, Liu, Jie, Tian, Bo, Liu, Xiaocui

Journal:

Year:

2019

Language:

english

File:

PDF, 2.99 MB

english, 2019

32

Systematic Identification and Evolution Analysis of Sox Genes in Coturnix japonica Based on Comparative Genomics

Jiang, Lan, Bi, De, Ding, Hengwu, Wu, Xuan, Zhu, Ran, Zeng, Juhua, Yang, Xiaojun, Kan, Xianzhao

Journal:

Year:

2019

Language:

english

File:

PDF, 3.77 MB

english, 2019

33

DNA Authentication of St John’s Wort (Hypericum perforatum L.) Commercial Products Targeting the ITS Region

Howard,, Hill,, Kreuzer,, Mali,, Masiero,, Slater,, Sgamma,

Journal:

Year:

2019

File:

PDF, 998 KB

2019

34

MicroRNAs Mediated Regulation of Expression of Nucleoside Analog Pathway Genes in Acute Myeloid Leukemia

Bhise,, Elsayed,, Cao,, Pounds,, Lamba,

Journal:

Year:

2019

Language:

english

File:

PDF, 2.35 MB

english, 2019

35

Shedding Light on a Secretive Tertiary Urodelean Relict: Hynobiid Salamanders (Paradactylodon persicus s.l.) from Iran, Illuminated by Phylogeographic, Developmental, and Transcriptomic Data

Stöck, Matthias, Fakharzadeh, Fatemeh, Kuhl, Heiner, Rozenblut-Kościsty, Beata, Leinweber, Sophie, Patel, Riddhi, Ebrahimi, Mehregan, Voitel, Sebastian, Schmidtler, Josef, Kami, Haji, Ogielska, Maria,

Journal:

Year:

2019

Language:

english

File:

PDF, 2.61 MB

english, 2019

36

Modulation and Evolution of Animal Development through microRNA Regulation of Gene Expression

Kittelmann,, McGregor,

Journal:

Year:

2019

Language:

english

File:

PDF, 879 KB

english, 2019

37

The Response to DNA Damage at Telomeric Repeats and Its Consequences for Telomere Function

Journal:

Year:

2019

Language:

english

File:

PDF, 2.25 MB

english, 2019

38

The Biochemical Role of the Human NEIL1 and NEIL3 DNA Glycosylases on Model DNA Replication Forks

Albelazi,, Martin,, Mohammed,, Mutti,, Elder,

Journal:

Year:

2019

Language:

english

File:

PDF, 2.53 MB

english, 2019

39

Molecular Characterization of a Dirofilaria immitis Cysteine Protease Inhibitor (Cystatin) and Its Possible Role in Filarial Immune Evasion

Dong, Xiaowei, Xu, Jing, Song, Hongyu, Liu, Yuchen, Wu, Maodi, Zhang, Haojie, Jing, Bo, Lai, Weimin, Gu, Xiaobin, Xie, Yue, Peng, Xuerong, Yang, Guangyou

Journal:

Year:

2019

File:

PDF, 15.13 MB

2019

40

Development and Validation of Sex-Specific Markers in Pelodiscus Sinensis Using Restriction Site-Associated DNA Sequencing

Liang,, Wang,, Sha,, Zou,

Journal:

Year:

2019

File:

PDF, 481 KB

2019

41

Identification of Transcription Factors Involved in the Regulation of Flowering in Adonis Amurensis Through Combined RNA-seq Transcriptomics and iTRAQ Proteomics

Zhou,, Sun,, Dai,, Feng,, Zhang,, Gong,, Wang,

Journal:

Year:

2019

File:

PDF, 1.82 MB

2019

42

EcoTILLING Reveals Natural Allelic Variations in Starch Synthesis Key Gene TaSSIV and Its Haplotypes Associated with Higher Thousand Grain Weight

Irshad,, Guo,, Zhang,, Gu,, Zhao,, Xie,, Xiong,, Zhao,, Ding,, Ma,, Liu,

Journal:

Year:

2019

File:

PDF, 969 KB

2019

43

Genetic Effects of LPIN1 Polymorphisms on Milk Production Traits in Dairy Cattle

Han, Bo, Yuan, Yuwei, Liang, Ruobing, Li, Yanhua, Liu, Lin, Sun, Dongxiao

Journal:

Year:

2019

Language:

english

File:

PDF, 720 KB

english, 2019

44

Analysis of DNA Methylation Patterns Associated with In Vitro Propagated Globe Artichoke Plants Using an EpiRADseq-Based Approach

Cerruti, Elisa, Comino, Cinzia, Acquadro, Alberto, Marconi, Gianpiero, Repetto, Anna Maria, Pisanu, Anna Barbara, Pilia, Roberto, Albertini, Emidio, Portis, Ezio

Journal:

Year:

2019

File:

PDF, 4.16 MB

2019

45

Genomic Features, Comparative Genomic Analysis, and Antimicrobial Susceptibility Patterns of Chryseobacterium arthrosphaerae Strain ED882-96 Isolated in Taiwan

Liang, Chih-Yu, Yang, Chih-Hui, Lai, Chung-Hsu, Huang, Yi-Han, Lin, Jiun-Nong

Journal:

Year:

2019

File:

PDF, 5.04 MB

2019

46

The Elaboration of miRNA Regulation and Gene Regulatory Networks in Plant–Microbe Interactions

de Vries,, de Vries,, Rose,

Journal:

Year:

2019

File:

PDF, 737 KB

2019

47

A Novel Aquaporin 12-like Protein from Chilo suppressalis: Characterization and Functional Analysis

Lu, Ming-Xing, Song, Jie, Xu, Jing, Wang, Guirong, Liu, Yang, Du, Yu-Zhou

Journal:

Year:

2019

File:

PDF, 2.64 MB

2019

48

Novel Molecular Signatures in the PIP4K/PIP5K Family of Proteins Specific for Different Isozymes and Subfamilies Provide Important Insights into the Evolutionary Divergence of this Protein Family

Khadka, Bijendra, Gupta, Radhey S.

Journal:

Year:

2019

File:

PDF, 8.74 MB

2019

49

miR-194 Accelerates Apoptosis of Aβ1–42-Transduced Hippocampal Neurons by Inhibiting Nrn1 and Decreasing PI3K/Akt Signaling Pathway Activity

Wang, Tingting, Cheng, Yaling, Han, Haibin, Liu, Jie, Tian, Bo, Liu, Xiaocui

Journal:

Year:

2019

File:

PDF, 2.99 MB

2019

50

Systematic Identification and Evolution Analysis of Sox Genes in Coturnix japonica Based on Comparative Genomics

Jiang, Lan, Bi, De, Ding, Hengwu, Wu, Xuan, Zhu, Ran, Zeng, Juhua, Yang, Xiaojun, Kan, Xianzhao

Journal:

Year:

2019

File:

PDF, 3.77 MB

2019

51

Tracking Biodistribution of Myeloid-Derived Cells in Murine Models of Breast Cancer

Li, Jun, Mai, Junhua, Hinkle, Louis, Lin, Daniel, Zhang, Jingxin, Liu, Xiaoling, Ramirez, Maricela R., Zu, Youli, Lokesh, Ganesh L., Volk, David E., Shen, Haifa

Journal:

Year:

2019

File:

PDF, 1.72 MB

2019

52

MicroRNAs Mediated Regulation of Expression of Nucleoside Analog Pathway Genes in Acute Myeloid Leukemia

Bhise,, Elsayed,, Cao,, Pounds,, Lamba,

Journal:

Year:

2019

File:

PDF, 2.35 MB

2019

53

Azathioprine Biotransformation in Young Patients with Inflammatory Bowel Disease: Contribution of Glutathione-S Transferase M1 and A1 Variants

Lucafò, Marianna, Stocco, Gabriele, Martelossi, Stefano, Favretto, Diego, Franca, Raffaella, Malusà, Noelia, Lora, Angela, Bramuzzo, Matteo, Naviglio, Samuele, Cecchin, Erika, Toffoli, Giuseppe, Ventu

Journal:

Year:

2019

Language:

english

File:

PDF, 1.07 MB

english, 2019

54

Perinatal Lead (Pb) Exposure and Cortical Neuron-Specific DNA Methylation in Male Mice

Dou, John F., Farooqui, Zishaan, Faulk, Christopher D., Barks, Amanda K., Jones, Tamara, Dolinoy, Dana C., Bakulski, Kelly M.

Journal:

Year:

2019

Language:

english

File:

PDF, 1.22 MB

english, 2019

55

Pacbio Sequencing Reveals Identical Organelle Genomes between American Cranberry (Vaccinium macrocarpon Ait.) and a Wild Relative

Diaz-Garcia, Luis, Rodriguez-Bonilla, Lorraine, Rohde, Jessica, Smith, Tyler, Zalapa, Juan

Journal:

Year:

2019

Language:

english

File:

PDF, 4.42 MB

english, 2019

56

Commensal and Pathogenic Members of the Dental Calculus Microbiome of Badia Pozzeveri Individuals from the 11th to 19th Centuries

Santiago-Rodriguez,, Fornaciari,, Fornaciari,, Luciani,, Marota,, Vercellotti,, Toranzos,, Giuffra,, Cano,

Journal:

Year:

2019

Language:

english

File:

PDF, 2.73 MB

english, 2019

57

Transcriptome Dynamics of Double Recessive Mutant, o2o2o16o16, Reveals the Transcriptional Mechanisms in the Increase of Its Lysine and Tryptophan Content in Maize

Wang, Wei, Dai, Yi, Wang, Mingchun, Yang, Wenpeng, Zhao, Degang

Journal:

Year:

2019

Language:

english

File:

PDF, 4.91 MB

english, 2019

58

Mitochondrial Introgression, Color Pattern Variation, and Severe Demographic Bottlenecks in Three Species of Malagasy Poison Frogs, Genus Mantella

Crottini,, Orozco-terWengel,, Rabemananjara,, Hauswaldt,, Vences,

Journal:

Year:

2019

Language:

english

File:

PDF, 5.04 MB

english, 2019

59

Identifying Selection Signatures for Backfat Thickness in Yorkshire Pigs Highlights New Regions Affecting Fat Metabolism

Ma, Haoran, Zhang, Saixian, Zhang, Kaili, Zhan, Huiwen, Peng, Xia, Xie, Shengsong, Li, Xinyun, Zhao, Shuhong, Ma, Yunlong

Journal:

Year:

2019

Language:

english

File:

PDF, 1.22 MB

english, 2019

60

How Often Do Protein Genes Navigate Valleys of Low Fitness?

Nelson, Erik, Grishin, Nick

Journal:

Year:

2019

Language:

english

File:

PDF, 523 KB

english, 2019

61

Evolutionary Insights of the ZW Sex Chromosomes in Snakes: A New Chapter Added by the Amazonian Puffing Snakes of the Genus Spilotes

Viana,, Ezaz,, de Bello Cioffi,, Jackson Almeida,, Feldberg,

Journal:

Year:

2019

Language:

english

File:

PDF, 1.86 MB

english, 2019

62

ORTHOSCOPE Analysis Reveals the Presence of the Cellulose Synthase Gene in All Tunicate Genomes but Not in Other Animal Genomes

Inoue,, Nakashima,, Satoh,

Journal:

Year:

2019

Language:

english

File:

PDF, 1.33 MB

english, 2019

63

Allele Frequency Difference AFD–An Intuitive Alternative to FST for Quantifying Genetic Population Differentiation

Journal:

Year:

2019

Language:

english

File:

PDF, 1.30 MB

english, 2019

64

Novel Y Chromosome Retrocopies in Canids Revealed through a Genome-Wide Association Study for Sex

Tsai, Kate L., Evans, Jacquelyn M., Noorai, Rooksana E., Starr-Moss, Alison N., Clark, Leigh Anne

Journal:

Year:

2019

Language:

english

File:

PDF, 2.17 MB

english, 2019

65

Going Deeper into High and Low Phylogenetic Relationships of Protura

Carapelli,, Bu,, Chen,, Nardi,, Leo,, Frati,, Luan,

Journal:

Year:

2019

Language:

english

File:

PDF, 2.28 MB

english, 2019

66

Impact of Chromosomal Rearrangements on the Interpretation of Lupin Karyotype Evolution

Susek, Karolina, Bielski, Wojciech, Czyż, Katarzyna B., Hasterok, Robert, Jackson, Scott A., Wolko, Bogdan, Naganowska, Barbara

Journal:

Year:

2019

Language:

english

File:

PDF, 4.97 MB

english, 2019

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