Volume 43; Issue 1

Genetics Selection Evolution

Volume 43; Issue 1

1

Different genomic relationship matrices for single-step analysis using phenotypic, pedigree and genomic information

Selma Forni, Ignacio Aguilar, Ignacy Misztal

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 293 KB

english, 2011

2

Genomic evaluations with many more genotypes

Paul M VanRaden, Jeffrey R O’Connell, George R Wiggans, Kent A Weigel

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 469 KB

english, 2011

3

Number and mode of inheritance of QTL influencing backfat thickness on SSC2p in Sino-European pig pedigrees

Flavie Tortereau, Hélène Gilbert, Henri CM Heuven, Jean-Pierre Bidanel, Martien AM Groenen, Juliette Riquet

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 464 KB

english, 2011

4

A combined long-range phasing and long haplotype imputation method to impute phase for SNP genotypes

John M Hickey, Brian P Kinghorn, Bruce Tier, James F Wilson, Neil Dunstan, Julius HJ van der Werf

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 470 KB

english, 2011

5

Quantitative trait loci analysis for leg weakness-related traits in a Duroc × Pietrain crossbred population

Watchara Laenoi, Muhammad Jasim Uddin, Mehmet Ulas Cinar, Christine Große-Brinkhaus, Dawit Tesfaye, Elisabeth Jonas, Armin M Scholz, Ernst Tholen, Christian Looft, Klaus Wimmers, Chirawath Phatsara, H

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 333 KB

english, 2011

6

Quantitative genetics of taura syndrome resistance in pacific white shrimp (penaeus vannamei): a cure model approach

Jørgen Ødegård, Thomas Gitterle, Per Madsen, Theo HE Meuwissen, M Hossein Yazdi, Bjarne Gjerde, Carlos Pulgarin, Morten Rye

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 402 KB

english, 2011

7

New investigations aroundCYP11A1and its possible involvement in an androstenone QTL characterised in Large White pigs

Annie Robic, Guillaume Le Mignon, Katia Fève, Catherine Larzul, Juliette Riquet

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 243 KB

english, 2011

8

Carcass conformation and fat cover scores in beef cattle: A comparison of threshold linear models vs grouped data models

Joaquim Tarrés, Marta Fina, Luis Varona, Jesús Piedrafita

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 503 KB

english, 2011

9

The nature, scope and impact of genomic prediction in beef cattle in the United States

Dorian J Garrick

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 294 KB

english, 2011

10

Different models of genetic variation and their effect on genomic evaluation

Samuel A Clark, John M Hickey, Julius HJ van der Werf

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 317 KB

english, 2011

11

Impacts of both reference population size and inclusion of a residual polygenic effect on the accuracy of genomic prediction

Zengting Liu, Franz R Seefried, Friedrich Reinhardt, Stephan Rensing, Georg Thaller, Reinhard Reents

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 549 KB

english, 2011

12

Genetic differentiation of European grayling (Thymallus thymallus) populations in Serbia, based on mitochondrial and nuclear DNA analyses

Saša Marić, Andrej Razpet, Vera Nikolić, Predrag Simonović

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 1.64 MB

english, 2011

13

The complete linkage disequilibrium test: a test that points to causative mutations underlying quantitative traits

Eivind Uleberg, Theo HE Meuwissen

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 681 KB

english, 2011

14

Principal component approach in variance component estimation for international sire evaluation

Anna-Maria Tyrisevä, Karin Meyer, W Freddy Fikse, Vincent Ducrocq, Jette Jakobsen, Martin H Lidauer, Esa A Mäntysaari

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 4.07 MB

english, 2011

15

Mapping quantitative trait loci (QTL) in sheep. IV. Analysis of lactation persistency and extended lactation traits in sheep

Elisabeth Jonas, Peter C Thomson, Evelyn JS Hall, David McGill, Mary K Lam, Herman W Raadsma

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 653 KB

english, 2011

16

Persistence of accuracy of genomic estimated breeding values over generations in layer chickens

Anna Wolc, Jesus Arango, Petek Settar, Janet E Fulton, Neil P O’Sullivan, Rudolf Preisinger, David Habier, Rohan Fernando, Dorian J Garrick, Jack CM Dekkers

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 675 KB

english, 2011

17

Comparative expression profiling ofE. coliandS. aureusinoculated primary mammary gland cells sampled from cows with different genetic predispositions for somatic cell score

Bodo Brand, Anja Hartmann, Dirk Repsilber, Bettina Griesbeck-Zilch, Olga Wellnitz, Christa Kühn, Siriluck Ponsuksili, Heinrich HD Meyer, Manfred Schwerin

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 1.53 MB

english, 2011

18

Allele coding in genomic evaluation

Ismo Strandén, Ole F Christensen

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 392 KB

english, 2011

19

Accuracy of multi-trait genomic selection using different methods

Mario PL Calus, Roel F Veerkamp

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 361 KB

english, 2011

20

A note on the rationale for estimating genealogical coancestry from molecular markers

Miguel Ángel Toro, Luis Alberto García-Cortés, Andrés Legarra

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 359 KB

english, 2011

21

Association between plasma metabolites and gene expression profiles in five porcine endocrine tissues

Bin Yang, Anna Bassols, Yolanda Saco, Miguel Pérez-Enciso

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 1.43 MB

english, 2011

22

Cloning and expression profiling of theVLDLRgene associated with egg performance in duck (Anas platyrhynchos)

Cui Wang, Shi-jun Li, Wen-hua Yu, Qing-wu Xin, Chuang Li, Yan-ping Feng, Xiu-li Peng, Yan-zhang Gong

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 491 KB

english, 2011

23

Fine mapping and replication of QTL in outbred chicken advanced intercross lines

Francois Besnier, Per Wahlberg, Lars Rönnegård, Weronica Ek, Leif Andersson, Paul B Siegel, Orjan Carlborg

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 913 KB

english, 2011

24

Accounting for genomic pre-selection in national BLUP evaluations in dairy cattle

Clotilde Patry, Vincent Ducrocq

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 204 KB

english, 2011

25

Casein SNP in Norwegian goats: additive and dominance effects on milk composition and quality

Binyam S Dagnachew, Georg Thaller, Sigbjørn Lien, Tormod Ådnøy

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 421 KB

english, 2011

26

Heterogeneity of variance components for preweaning growth in Romane sheep due to the number of lambs reared

Ingrid David, Frédéric Bouvier, Dominique François, Jean-Paul Poivey, Laurence Tiphine

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 251 KB

english, 2011

27

Principal component and factor analytic models in international sire evaluation

Anna-Maria Tyrisevä, Karin Meyer, W Freddy Fikse, Vincent Ducrocq, Jette Jakobsen, Martin H Lidauer, Esa A Mäntysaari

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 367 KB

english, 2011

28

Identification of Mendelian inconsistencies between SNP and pedigree information of sibs

Mario PL Calus, Han A Mulder, John WM Bastiaansen

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 364 KB

english, 2011

29

Using the Pareto principle in genome-wide breeding value estimation

Xijiang Yu, Theo HE Meuwissen

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 209 KB

english, 2011

30

Impact of the use of cryobank samples in a selected cattle breed: a simulation study

Grégoire Leroy, Coralie Danchin-Burge, Etienne Verrier

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 238 KB

english, 2011

31

Searching for phenotypic causal networks involving complex traits: an application to European quail

Bruno D Valente, Guilherme JM Rosa, Martinho A Silva, Rafael B Teixeira, Robledo A Torres

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 421 KB

english, 2011

32

Deregressed EBV as the response variable yield more reliable genomic predictions than traditional EBV in pure-bred pigs

Tage Ostersen, Ole F Christensen, Mark Henryon, Bjarne Nielsen, Guosheng Su, Per Madsen

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 176 KB

english, 2011

33

An algorithm for efficient constrained mate selection

Brian P Kinghorn

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 556 KB

english, 2011

34

Accuracies of genomic breeding values in American Angus beef cattle using K-means clustering for cross-validation

Mahdi Saatchi, Mathew C McClure, Stephanie D McKay, Megan M Rolf, JaeWoo Kim, Jared E Decker, Tasia M Taxis, Richard H Chapple, Holly R Ramey, Sally L Northcutt, Stewart Bauck, Brent Woodward, Jack CM

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 635 KB

english, 2011

35

Breeding value prediction for production traits in layer chickens using pedigree or genomic relationships in a reduced animal model

Anna Wolc, Chris Stricker, Jesus Arango, Petek Settar, Janet E Fulton, Neil P O’Sullivan, Rudolf Preisinger, David Habier, Rohan Fernando, Dorian J Garrick, Susan J Lamont, Jack CM Dekkers

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 560 KB

english, 2011

36

Inferring causal phenotype networks using structural equation models

Guilherme JM Rosa, Bruno D Valente, Gustavo de los Campos, Xiao-Lin Wu, Daniel Gianola, Martinho A Silva

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 1.08 MB

english, 2011

37

Genome-wide prediction of discrete traits using bayesian regressions and machine learning

Oscar González-Recio, Selma Forni

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 896 KB

english, 2011

38

Mapping of a milk production quantitative trait locus to a 1.056 Mb region on bovine chromosome 5 in the Fleckvieh dual purpose cattle breed

Ashraf Awad, Ingolf Russ, Martin Förster, Ivica Medugorac

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 397 KB

english, 2011

39

Effectiveness analysis of resistance and tolerance to infection

Johann C Detilleux

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 1.20 MB

english, 2011

40

Performance of penalized maximum likelihood in estimation of genetic covariances matrices

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 402 KB

english, 2011

41

Simulation study for analysis of binary responses in the presence of extreme case problems

Romdhane Rekaya, Robyn L Sapp, El H Hay, Ryan Davis, Joseph K Bertrand

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 164 KB

english, 2011

42

Whole-genome SNP association analysis of reproduction traits in the Finnish Landrace pig breed

Pekka Uimari, Anu Sironen, Marja-Liisa Sevón-Aimonen

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 224 KB

english, 2011

43

A common reference population from four European Holstein populations increases reliability of genomic predictions

Mogens S Lund, Adrianus PW de Roos, Alfred G de Vries, Tom Druet, Vincent Ducrocq, Sébastien Fritz, François Guillaume, Bernt Guldbrandtsen, Zenting Liu, Reinhard Reents, Chris Schrooten, Franz Seefri

Journal:

Genetics Selection Evolution

Year:

2011

Language:

english

File:

PDF, 203 KB

english, 2011

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