Volume 14; Issue 8

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Genome Biology
Volume 14; Issue 8

Genome Biology

Volume 14; Issue 8

1

Genome-wide analysis identifies a functional association of Tet1 and Polycomb repressive complex 2 in mouse embryonic stem cells

Neri, Francesco, Incarnato, Danny, Krepelova, Anna, Rapelli, Stefania, Pagnani, Andrea, Zecchina, Riccardo, Parlato, Caterina, Oliviero, Salvatore

Journal:

Year:

2013

Language:

english

File:

PDF, 1.78 MB

english, 2013

2

Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization

Menoret, Delphine, Santolini, Marc, Fernandes, Isabelle, Spokony, Rebecca, Zanet, Jennifer, Gonzalez, Ignacio, Latapie, Yvan, Ferrer, Pierre, Rouault, Hervé, White, Kevin P, Besse, Philippe, Hakim, Vi

Journal:

Year:

2013

Language:

english

File:

PDF, 2.09 MB

english, 2013

3

PROmiRNA: a new miRNA promoter recognition method uncovers the complex regulation of intronic miRNAs

Marsico, Annalisa, Huska, Matthew R, Lasserre, Julia, Hu, Haiyang, Vucicevic, Dubravka, Musahl, Anne, Orom, Ulf, Vingron, Martin

Journal:

Year:

2013

Language:

english

File:

PDF, 1.48 MB

english, 2013

4

Virmid: accurate detection of somatic mutations with sample impurity inference

Kim, Sangwoo, Jeong, Kyowon, Bhutani, Kunal, Lee, Jeong, Patel, Anand, Scott, Eric, Nam, Hojung, Lee, Hayan, Gleeson, Joseph G, Bafna, Vineet

Journal:

Year:

2013

Language:

english

File:

PDF, 822 KB

english, 2013

5

Web Apollo: a web-based genomic annotation editing platform

Lee, Eduardo, Helt, Gregg A, Reese, Justin T, Munoz-Torres, Monica C, Childers, Chris P, Buels, Robert M, Stein, Lincoln, Holmes, Ian H, Elsik, Christine G, Lewis, Suzanna E

Journal:

Year:

2013

Language:

english

File:

PDF, 966 KB

english, 2013

6

The genome and transcriptome ofHaemonchus contortus, a key model parasite for drug and vaccine discovery

Laing, Roz, Kikuchi, Taisei, Martinelli, Axel, Tsai, Isheng J, Beech, Robin N, Redman, Elizabeth, Holroyd, Nancy, Bartley, David J, Beasley, Helen, Britton, Collette, Curran, David, Devaney, Eileen, G

Journal:

Year:

2013

Language:

english

File:

PDF, 1.10 MB

english, 2013

7

BreakTrans: uncovering the genomic architecture of gene fusions

Chen, Ken, Navin, Nicholas E, Wang, Yong, Schmidt, Heather K, Wallis, John W, Niu, Beifang, Fan, Xian, Zhao, Hao, McLellan, Michael D, Hoadley, Katherine A, Mardis, Elaine R, Ley, Timothy J, Perou, Ch

Journal:

Year:

2013

Language:

english

File:

PDF, 406 KB

english, 2013

8

A global profiling of uncapped mRNAs under cold stress reveals specific decay patterns and endonucleolytic cleavages inBrachypodium distachyon

Zhang, Jingyu, Mao, Zhiwei, Chong, Kang

Journal:

Year:

2013

Language:

english

File:

PDF, 898 KB

english, 2013

9

Ontogeny, distribution and potential roles of 5-hydroxymethylcytosine in human liver function

Ivanov, Maxim, Kals, Mart, Kacevska, Marina, Barragan, Isabel, Kasuga, Kie, Rane, Anders, Metspalu, Andres, Milani, Lili, Ingelman-Sundberg, Magnus

Journal:

Year:

2013

Language:

english

File:

PDF, 567 KB

english, 2013

10

Sustained-input switches for transcription factors and microRNAs are central building blocks of eukaryotic gene circuits

Molly Megraw,Sayan Mukherjee,Uwe Ohler

Journal:

Year:

2013

Language:

english

File:

PDF, 856 KB

english, 2013

11

Astrogenomics: big data, old problems, old solutions?

Aaron Golden,S George Djorgovski,John M Greally

Journal:

Year:

2013

Language:

english

File:

PDF, 108 KB

english, 2013

12

Learning the language of post-transcriptional gene regulation

Stefanie Gerstberger,Markus Hafner,Thomas Tuschl

Journal:

Year:

2013

Language:

english

File:

PDF, 141 KB

english, 2013

13

DNA methylation: an identity card for brain cells

Ambre Bender,Michael Weber

Journal:

Year:

2013

Language:

english

File:

PDF, 98 KB

english, 2013

14

Conquering computational challenges of omics data and post-ENCODE paradigms

Yves A Lussier,Haiquan Li,Mark Maienschein-Cline

Journal:

Year:

2013

Language:

english

File:

PDF, 94 KB

english, 2013

15

Measuring cell-type specific differential methylation in human brain tissue

Montaño, Carolina M, Irizarry, Rafael A, Kaufmann, Walter E, Talbot, Konrad, Gur, Raquel E, Feinberg, Andrew P, Taub, Margaret A

Journal:

Year:

2013

Language:

english

File:

PDF, 575 KB

english, 2013

16

The genome and developmental transcriptome of the strongylid nematodeHaemonchus contortus

Schwarz, Erich M, Korhonen, Pasi K, Campbell, Bronwyn E, Young, Neil D, Jex, Aaron R, Jabbar, Abdul, Hall, Ross S, Mondal, Alinda, Howe, Adina C, Pell, Jason, Hofmann, Andreas, Boag, Peter R, Zhu, Xin

Journal:

Year:

2013

Language:

english

File:

PDF, 1.29 MB

english, 2013