Volume 6; Issue 10

Genome Biology and Evolution

Volume 6; Issue 10

1

Disrupting Mitochondrial-Nuclear Coevolution Affects OXPHOS Complex I Integrity and Impacts Human Health

Gershoni, M., Levin, L., Ovadia, O., Toiw, Y., Shani, N., Dadon, S., Barzilai, N., Bergman, A., Atzmon, G., Wainstein, J., Tsur, A., Nijtmans, L., Glaser, B., Mishmar, D.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 914 KB

english, 2014

2

Monotreme Lactation Protein Is Highly Expressed in Monotreme Milk and Provides Antimicrobial Protection

Enjapoori, A. K., Grant, T. R., Nicol, S. C., Lefevre, C. M., Nicholas, K. R., Sharp, J. A.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.99 MB

english, 2014

3

Complex Patterns of Gene Fission in the Eukaryotic Folate Biosynthesis Pathway

Maguire, F., Henriquez, F. L., Leonard, G., Dacks, J. B., Brown, M. W., Richards, T. A.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.19 MB

english, 2014

4

Evolutionary Story of a Satellite DNA from Phodopus sungorus (Rodentia, Cricetidae)

Paco, A., Adega, F., Me trovi , N., Plohl, M., Chaves, R.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 890 KB

english, 2014

5

Evolution and Functional Implications of the Tricarboxylic Acid Cycle as Revealed by Phylogenetic Analysis

Cavalcanti, J. H. F., Esteves-Ferreira, A. A., Quinhones, C. G. S., Pereira-Lima, I. A., Nunes-Nesi, A., Fernie, A. R., Araujo, W. L.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 2.18 MB

english, 2014

6

First Ancient Mitochondrial Human Genome from a Prepastoralist Southern African

Morris, A. G., Heinze, A., Chan, E. K. F., Smith, A. B., Hayes, V. M.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 731 KB

english, 2014

7

The Transcriptome of an Amphioxus, Asymmetron lucayanum, from the Bahamas: A Window into Chordate Evolution

Yue, J.-X., Yu, J.-K., Putnam, N. H., Holland, L. Z.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 510 KB

english, 2014

8

Algae Sense Exact Temperatures: Small Heat Shock Proteins Are Expressed at the Survival Threshold Temperature in Cyanidioschyzon merolae and Chlamydomonas reinhardtii

Kobayashi, Y., Harada, N., Nishimura, Y., Saito, T., Nakamura, M., Fujiwara, T., Kuroiwa, T., Misumi, O.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.16 MB

english, 2014

9

Specific Modifications of Histone Tails, but Not DNA Methylation, Mirror the Temporal Variation of Mammalian Recombination Hotspots

Zeng, J., Yi, S. V.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 672 KB

english, 2014

10

Gene Duplication, Population Genomics, and Species-Level Differentiation within a Tropical Mountain Shrub

Mastretta-Yanes, A., Zamudio, S., Jorgensen, T. H., Arrigo, N., Alvarez, N., Pinero, D., Emerson, B. C.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1007 KB

english, 2014

11

Variation in piRNA and Transposable Element Content in Strains of Drosophila melanogaster

Song, J., Liu, J., Schnakenberg, S. L., Ha, H., Xing, J., Chen, K. C.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 409 KB

english, 2014

12

New Tricks for "Old" Domains: How Novel Architectures and Promiscuous Hubs Contributed to the Organization and Evolution of the ECM

Cromar, G., Wong, K.-C., Loughran, N., On, T., Song, H., Xiong, X., Zhang, Z., Parkinson, J.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 2.26 MB

english, 2014

13

Faster-X Effects in Two Drosophila Lineages

Avila, V., Marion de Proce, S., Campos, J. L., Borthwick, H., Charlesworth, B., Betancourt, A. J.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 508 KB

english, 2014

14

Comparative Genomics Reveals Multiple Genetic Backgrounds of Human Pathogenicity in the Trypanosoma brucei Complex

Sistrom, M., Evans, B., Bjornson, R., Gibson, W., Balmer, O., Maser, P., Aksoy, S., Caccone, A.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 604 KB

english, 2014

15

The Genomic Diversification of the Whole Acinetobacter Genus: Origins, Mechanisms, and Consequences

Touchon, M., Cury, J., Yoon, E.-J., Krizova, L., Cerqueira, G. C., Murphy, C., Feldgarden, M., Wortman, J., Clermont, D., Lambert, T., Grillot-Courvalin, C., Nemec, A., Courvalin, P., Rocha, E. P. C.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.54 MB

english, 2014

16

Population Genomic Analysis Reveals Highly Conserved Mitochondrial Genomes in the Yeast Species Lachancea thermotolerans

Freel, K. C., Friedrich, A., Hou, J., Schacherer, J.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 417 KB

english, 2014

17

Association between the Dynamics of Multiple Replication Origins and the Evolution of Multireplicon Genome Architecture in Haloarchaea

Wu, Z., Yang, H., Liu, J., Wang, L., Xiang, H.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.23 MB

english, 2014

18

Elucidating the Genotype-Phenotype Relationships and Network Perturbations of Human Shared and Specific Disease Genes from an Evolutionary Perspective

Begum, T., Ghosh, T. C.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 539 KB

english, 2014

19

Phylogenomic and MALDI-TOF MS Analysis of Streptococcus sinensis HKU4T Reveals a Distinct Phylogenetic Clade in the Genus Streptococcus

Teng, J. L. L., Huang, Y., Tse, H., Chen, J. H. K., Tang, Y., Lau, S. K. P., Woo, P. C. Y.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 2.05 MB

english, 2014

20

Extensive Horizontal Gene Transfer during Staphylococcus aureus Co-colonization In Vivo

McCarthy, A. J., Loeffler, A., Witney, A. A., Gould, K. A., Lloyd, D. H., Lindsay, J. A.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.06 MB

english, 2014

21

Divergent and Conserved Elements Comprise the Chemoreceptive Repertoire of the Nonblood-Feeding Mosquito Toxorhynchites amboinensis

Zhou, X., Rinker, D. C., Pitts, R. J., Rokas, A., Zwiebel, L. J.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 669 KB

english, 2014

22

The Mitochondrial Genomes of the Glaucophytes Gloeochaete wittrockiana and Cyanoptyche gloeocystis: Multilocus Phylogenetics Suggests a Monophyletic Archaeplastida

Jackson, C. J., Reyes-Prieto, A.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.21 MB

english, 2014

23

Signs of Neutralization in a Redundant Gene Involved in Homologous Recombination in Wolbachia Endosymbionts

Badawi, M., Giraud, I., Vavre, F., Greve, P., Cordaux, R.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 441 KB

english, 2014

24

Rolling-Circle Transposons Catalyze Genomic Innovation in a Mammalian Lineage

Thomas, J., Phillips, C. D., Baker, R. J., Pritham, E. J.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 936 KB

english, 2014

25

The Influence of Selection for Protein Stability on dN/dS Estimations

Dasmeh, P., Serohijos, A. W. R., Kepp, K. P., Shakhnovich, E. I.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 7.70 MB

english, 2014

26

The Hsp90-Dependent Proteome Is Conserved and Enriched for Hub Proteins with High Levels of Protein-Protein Connectivity

Gopinath, R. K., You, S.-T., Chien, K.-Y., Swamy, K. B. S., Yu, J.-S., Schuyler, S. C., Leu, J.-Y.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 759 KB

english, 2014

27

Structural Divergence in Vertebrate Phylogeny of a Duplicated Prototype Galectin

Bhat, R., Chakraborty, M., Mian, I. S., Newman, S. A.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 757 KB

english, 2014

28

Transcription Factors Bind Negatively Selected Sites within Human mtDNA Genes

Blumberg, A., Sri Sailaja, B., Kundaje, A., Levin, L., Dadon, S., Shmorak, S., Shaulian, E., Meshorer, E., Mishmar, D.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 904 KB

english, 2014

29

Phylogenomics and Evolutionary Dynamics of the Family Actinomycetaceae

Zhao, K., Li, W., Kang, C., Du, L., Huang, T., Zhang, X., Wu, M., Yue, B.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.19 MB

english, 2014

30

"Out of Pollen" Hypothesis for Origin of New Genes in Flowering Plants: Study from Arabidopsis thaliana

Wu, D.-D., Wang, X., Li, Y., Zeng, L., Irwin, D. M., Zhang, Y.-P.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 826 KB

english, 2014

31

Highlight: The "Out of Pollen" Hypothesis--In Plants, Animals New Genes Originate in Male Sex Tissue

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 144 KB

english, 2014

32

Highlight--The Deep Mystery of Mother's Milk

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 148 KB

english, 2014