Volume 6; Issue 9

Genome Biology and Evolution

Volume 6; Issue 9

1

Six Subgroups and Extensive Recent Duplications Characterize the Evolution of the Eukaryotic Tubulin Protein Family

Findeisen, P., Muhlhausen, S., Dempewolf, S., Hertzog, J., Zietlow, A., Carlomagno, T., Kollmar, M.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 6.23 MB

english, 2014

2

A Polychaete's Powerful Punch: Venom Gland Transcriptomics of Glycera Reveals a Complex Cocktail of Toxin Homologs

von Reumont, B. M., Campbell, L. I., Richter, S., Hering, L., Sykes, D., Hetmank, J., Jenner, R. A., Bleidorn, C.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.78 MB

english, 2014

3

Gene Transfers Shaped the Evolution of De Novo NAD+ Biosynthesis in Eukaryotes

Ternes, C. M., Schonknecht, G.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1024 KB

english, 2014

4

Natural Selection on Coding and Noncoding DNA Sequences Is Associated with Virulence Genes in a Plant Pathogenic Fungus

Rech, G. E., Sanz-Martin, J. M., Anisimova, M., Sukno, S. A., Thon, M. R.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 754 KB

english, 2014

5

Whole-Genome Sequence Analysis of the Naturally Competent Acinetobacter baumannii Clinical Isolate A118

Traglia, G. M., Chua, K., Centron, D., Tolmasky, M. E., Ramirez, M. S.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 576 KB

english, 2014

6

Missing Genes, Multiple ORFs, and C-to-U Type RNA Editing in Acrasis kona (Heterolobosea, Excavata) Mitochondrial DNA

Fu, C.-J., Sheikh, S., Miao, W., Andersson, S. G. E., Baldauf, S. L.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 2.12 MB

english, 2014

7

Comparative Genomics of Saccharomyces cerevisiae Natural Isolates for Bioenergy Production

Wohlbach, D. J., Rovinskiy, N., Lewis, J. A., Sardi, M., Schackwitz, W. S., Martin, J. A., Deshpande, S., Daum, C. G., Lipzen, A., Sato, T. K., Gasch, A. P.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 756 KB

english, 2014

8

Microsporidian Genomes Harbor a Diverse Array of Transposable Elements that Demonstrate an Ancestry of Horizontal Exchange with Metazoans

Parisot, N., Pelin, A., Gasc, C., Polonais, V., Belkorchia, A., Panek, J., El Alaoui, H., Biron, D. G., Brasset, E., Vaury, C., Peyret, P., Corradi, N., Peyretaillade, E., Lerat, E.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.34 MB

english, 2014

9

Conserved Temporal Patterns of MicroRNA Expression in Drosophila Support a Developmental Hourglass Model

Ninova, M., Ronshaugen, M., Griffiths-Jones, S.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 900 KB

english, 2014

10

Lineage-Specific Conserved Noncoding Sequences of Plant Genomes: Their Possible Role in Nucleosome Positioning

Hettiarachchi, N., Kryukov, K., Sumiyama, K., Saitou, N.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.06 MB

english, 2014

11

Evidence for the Retention of Two Evolutionary Distinct Plastids in Dinoflagellates with Diatom Endosymbionts

Hehenberger, E., Imanian, B., Burki, F., Keeling, P. J.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.17 MB

english, 2014

12

Characterization of Newly Gained Introns in Daphnia Populations

Li, W., Kuzoff, R., Wong, C. K., Tucker, A., Lynch, M.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.61 MB

english, 2014

13

Genomic Organization, Transcriptomic Analysis, and Functional Characterization of Avian - and -Keratins in Diverse Feather Forms

Ng, C. S., Wu, P., Fan, W.-L., Yan, J., Chen, C.-K., Lai, Y.-T., Wu, S.-M., Mao, C.-T., Chen, J.-J., Lu, M.-Y. J., Ho, M.-R., Widelitz, R. B., Chen, C.-F., Chuong, C.-M., Li, W.-H.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.81 MB

english, 2014

14

Genomic Evidence for the Emergence and Evolution of Pathogenicity and Niche Preferences in the Genus Campylobacter

Iraola, G., Perez, R., Naya, H., Paolicchi, F., Pastor, E., Valenzuela, S., Calleros, L., Velilla, A., Hernandez, M., Morsella, C.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.05 MB

english, 2014

15

The Transcriptome of Nacobbus aberrans Reveals Insights into the Evolution of Sedentary Endoparasitism in Plant-Parasitic Nematodes

Eves-van den Akker, S., Lilley, C. J., Danchin, E. G. J., Rancurel, C., Cock, P. J. A., Urwin, P. E., Jones, J. T.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 902 KB

english, 2014

16

Comparative Transcriptomics in East African Cichlids Reveals Sex- and Species-Specific Expression and New Candidates for Sex Differentiation in Fishes

Bohne, A., Sengstag, T., Salzburger, W.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 2.05 MB

english, 2014

17

Comparative and Evolutionary Analysis of Major Peanut Allergen Gene Families

Ratnaparkhe, M. B., Lee, T.-H., Tan, X., Wang, X., Li, J., Kim, C., Rainville, L. K., Lemke, C., Compton, R. O., Robertson, J., Gallo, M., Bertioli, D. J., Paterson, A. H.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 6.85 MB

english, 2014

18

Phylogenomic Study Indicates Widespread Lateral Gene Transfer in Entamoeba and Suggests a Past Intimate Relationship with Parabasalids

Grant, J. R., Katz, L. A.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.91 MB

english, 2014

19

Genomic Signatures of Distributive Conjugal Transfer among Mycobacteria

Mortimer, T. D., Pepperell, C. S.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 635 KB

english, 2014

20

Genomic Evolution of Saccharomyces cerevisiae under Chinese Rice Wine Fermentation

Li, Y., Zhang, W., Zheng, D., Zhou, Z., Yu, W., Zhang, L., Feng, L., Liang, X., Guan, W., Zhou, J., Chen, J., Lin, Z.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 846 KB

english, 2014

21

Extensive Gene Remodeling in the Viral World: New Evidence for Nongradual Evolution in the Mobilome Network

Jachiet, P.-A., Colson, P., Lopez, P., Bapteste, E.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.20 MB

english, 2014

22

Protein Subcellular Relocalization of Duplicated Genes in Arabidopsis

Liu, S.-L., Pan, A. Q., Adams, K. L.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 802 KB

english, 2014

23

The Evolution of the Four Subunits of Voltage-Gated Calcium Channels: Ancient Roots, Increasing Complexity, and Multiple Losses

Moran, Y., Zakon, H. H.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 751 KB

english, 2014

24

Chromosomal Distribution of Cytonuclear Genes in a Dioecious Plant with Sex Chromosomes

Hough, J., Agren, J. A., Barrett, S. C. H., Wright, S. I.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 239 KB

english, 2014

25

Analysis of the Opsin Repertoire in the Tardigrade Hypsibius dujardini Provides Insights into the Evolution of Opsin Genes in Panarthropoda

Hering, L., Mayer, G.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.14 MB

english, 2014

26

Genome Diversity and Divergence in Drosophila mauritiana: Multiple Signatures of Faster X Evolution

Garrigan, D., Kingan, S. B., Geneva, A. J., Vedanayagam, J. P., Presgraves, D. C.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.24 MB

english, 2014

27

Evidence for Deep Regulatory Similarities in Early Developmental Programs across Highly Diverged Insects

Kazemian, M., Suryamohan, K., Chen, J.-Y., Zhang, Y., Samee, M. A. H., Halfon, M. S., Sinha, S.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.96 MB

english, 2014

28

Evolution and Comparative Genomics of Campylobacter jejuni ST-677 Clonal Complex

Kivisto, R. I., Kovanen, S., Skarp-de Haan, A., Schott, T., Rahkio, M., Rossi, M., Hanninen, M.-L.

Journal:

Genome Biology and Evolution

Year:

2014

Language:

english

File:

PDF, 1.40 MB

english, 2014

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