Volume 7; Issue 12

Genome Biology and Evolution

Volume 7; Issue 12

1

Inferring Indel Parameters using a Simulation-based Approach

Levy Karin, Eli, Rabin, Avigayel, Ashkenazy, Haim, Shkedy, Dafna, Avram, Oren, Cartwright, Reed A., Pupko, Tal

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 2.01 MB

english, 2015

2

Genome-Wide Analysis of Evolutionary Markers of Human Influenza A(H1N1)pdm09 and A(H3N2) Viruses May Guide Selection of Vaccine Strain Candidates

Belanov, Sergei S., Bychkov, Dmitrii, Benner, Christian, Ripatti, Samuli, Ojala, Teija, Kankainen, Matti, Kai Lee, Hong, Wei-Tze Tang, Julian, Kainov, Denis E.

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.45 MB

english, 2015

3

Predicting RAD-seq Marker Numbers across the Eukaryotic Tree of Life

Herrera, Santiago, Reyes-Herrera, Paula H., Shank, Timothy M.

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 9.40 MB

english, 2015

4

The X Chromosome of Hemipteran Insects: Conservation, Dosage Compensation and Sex-Biased Expression

Pal, Arka, Vicoso, Beatriz

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 838 KB

english, 2015

5

The repABC Plasmids with Quorum-Regulated Transfer Systems in Members of the Rhizobiales Divide into Two Structurally and Separately Evolving Groups

Wetzel, Margaret E., Olsen, Gary J., Chakravartty, Vandana, Farrand, Stephen K.

Journal:

Genome Biology and Evolution

Year:

2015

File:

PDF, 1.38 MB

2015

6

Low Temperature Adaptation Is Not the Opposite Process of High Temperature Adaptation in Terms of Changes in Amino Acid Composition

Yang, Ling-Ling, Tang, Shu-Kun, Huang, Ying, Zhi, Xiao-Yang

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 582 KB

english, 2015

7

Highlights—Does Methylation Make the Parent? A First Dive into the Genetics of Social Beetles

Venton, Danielle

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 137 KB

english, 2015

8

Repetitive DNA and Plant Domestication: Variation in Copy Number and Proximity to Genes of LTR-Retrotransposons among Wild and Cultivated Sunflower ( Helianthus annuus ) Genotypes

Mascagni, Flavia, Barghini, Elena, Giordani, Tommaso, Rieseberg, Loren H., Cavallini, Andrea, Natali, Lucia

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.10 MB

english, 2015

9

Comparative Genomics of Sibling Fungal Pathogenic Taxa Identifies Adaptive Evolution without Divergence in Pathogenicity Genes or Genomic Structure

Sillo, Fabiano, Garbelotto, Matteo, Friedman, Maria, Gonthier, Paolo

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.06 MB

english, 2015

10

The repABC Plasmids with Quorum-Regulated Transfer Systems in Members of the Rhizobiales Divide into Two Structurally and Separately Evolving Groups

Wetzel, Margaret E., Olsen, Gary J., Chakravartty, Vandana, Farrand, Stephen K.

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.38 MB

english, 2015

11

Comparative Genomics of the Genus Porphyromonas Identifies Adaptations for Heme Synthesis within the Prevalent Canine Oral Species Porphyromonas cangingivalis

O’Flynn, Ciaran, Deusch, Oliver, Darling, Aaron E., Eisen, Jonathan A., Wallis, Corrin, Davis, Ian J., Harris, Stephen J.

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.83 MB

english, 2015

12

Determining the Position of Storks on the Phylogenetic Tree of Waterbirds by Retroposon Insertion Analysis

Kuramoto, Tae, Nishihara, Hidenori, Watanabe, Maiko, Okada, Norihiro

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 664 KB

english, 2015

13

Reassessing the Evolutionary History of the 17q21 Inversion Polymorphism

Alves, Joao M., Lima, Ana C., Pais, Isa A., Amir, Nadir, Celestino, Ricardo, Piras, Giovanna, Monne, Maria, Comas, David, Heutink, Peter, Chikhi, Lounès, Amorim, António, Lopes, Alexandra M.

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 876 KB

english, 2015

14

Patterns of Gene Conversion in Duplicated Yeast Histones Suggest Strong Selection on a Coadapted Macromolecular Complex

Scienski, Kathy, Fay, Justin C., Conant, Gavin C.

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 803 KB

english, 2015

15

The Utility of Genome Skimming for Phylogenomic Analyses as Demonstrated for Glycerid Relationships (Annelida, Glyceridae)

Richter, Sandy, Schwarz, Francine, Hering, Lars, Böggemann, Markus, Bleidorn, Christoph

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.18 MB

english, 2015

16

Extensive Admixture and Selective Pressure Across the Sahel Belt

Triska, Petr, Soares, Pedro, Patin, Etienne, Fernandes, Veronica, Cerny, Viktor, Pereira, Luisa

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.41 MB

english, 2015

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