Volume 24; Issue 10

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Genome Research
Volume 24; Issue 10

Genome Research

Volume 24; Issue 10

1

Evolutionarily diverse determinants of meiotic DNA break and recombination landscapes across the genome

Fowler, Kyle R., Sasaki, Mariko, Milman, Neta, Keeney, Scott, Smith, Gerald R.

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.14 MB

english, 2014

2

T-cell receptor repertoires share a restricted set of public and abundant CDR3 sequences that are associated with self-related immunity

Madi, Asaf, Shifrut, Eric, Reich-Zeliger, Shlomit, Gal, Hilah, Best, Katharine, Ndifon, Wilfred, Chain, Benjamin, Cohen, Irun R., Friedman, Nir

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.67 MB

english, 2014

3

Decoding ChIP-seq with a double-binding signal refines binding peaks to single-nucleotides and predicts cooperative interaction

Gomes, Antonio L.C., Abeel, Thomas, Peterson, Matthew, Azizi, Elham, Lyubetskaya, Anna, Carvalho, Luís, Galagan, James

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.12 MB

english, 2014

4

Probing the effect of promoters on noise in gene expression using thousands of designed sequences

Sharon, Eilon, van Dijk, David, Kalma, Yael, Keren, Leeat, Manor, Ohad, Yakhini, Zohar, Segal, Eran

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 4.06 MB

english, 2014

5

Differential retention and divergent resolution of duplicate genes following whole-genome duplication

McGrath, Casey L., Gout, Jean-Francois, Johri, Parul, Doak, Thomas G., Lynch, Michael

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 936 KB

english, 2014

6

High-throughput functional testing of ENCODE segmentation predictions

Kwasnieski, Jamie C., Fiore, Christopher, Chaudhari, Hemangi G., Cohen, Barak A.

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 2.82 MB

english, 2014

7

Cotranscriptional histone H2B monoubiquitylation is tightly coupled with RNA polymerase II elongation rate

Fuchs, Gilad, Hollander, Dror, Voichek, Yoav, Ast, Gil, Oren, Moshe

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 2.15 MB

english, 2014

8

OutKnocker: a web tool for rapid and simple genotyping of designer nuclease edited cell lines

Schmid-Burgk, Jonathan L., Schmidt, Tobias, Gaidt, Moritz M., Pelka, Karin, Latz, Eicke, Ebert, Thomas S., Hornung, Veit

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 652 KB

english, 2014

9

The PML-associated protein DEK regulates the balance of H3.3 loading on chromatin and is important for telomere integrity

Ivanauskiene, Kristina, Delbarre, Erwan, McGhie, James D., Küntziger, Thomas, Wong, Lee H., Collas, Philippe

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 3.19 MB

english, 2014

10

Genome-wide DNA methylation patterns in LSH mutant reveals de-repression of repeat elements and redundant epigenetic silencing pathways

Yu, Weishi, McIntosh, Carl, Lister, Ryan, Zhu, Iris, Han, Yixing, Ren, Jianke, Landsman, David, Lee, Eunice, Briones, Victorino, Terashima, Minoru, Leighty, Robert, Ecker, Joseph R., Muegge, Kathrin

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 3.07 MB

english, 2014

11

Large-scale identification of chemically induced mutations in Drosophila melanogaster

Haelterman, Nele A., Jiang, Lichun, Li, Yumei, Bayat, Vafa, Sandoval, Hector, Ugur, Berrak, Tan, Kai Li, Zhang, Ke, Bei, Danqing, Xiong, Bo, Charng, Wu-Lin, Busby, Theodore, Jawaid, Adeel, David, Gabr

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.39 MB

english, 2014

12

Genomic analysis of the causative agents of coccidiosis in domestic chickens

Reid, Adam J., Blake, Damer P., Ansari, Hifzur R., Billington, Karen, Browne, Hilary P., Bryant, Josephine, Dunn, Matt, Hung, Stacy S., Kawahara, Fumiya, Miranda-Saavedra, Diego, Malas, Tareq B., Mour

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 2.26 MB

english, 2014

13

C. elegans whole-genome sequencing reveals mutational signatures related to carcinogens and DNA repair deficiency

Meier, Bettina, Cooke, Susanna L., Weiss, Joerg, Bailly, Aymeric P., Alexandrov, Ludmil B., Marshall, John, Raine, Keiran, Maddison, Mark, Anderson, Elizabeth, Stratton, Michael R., Gartner, Anton, Ca

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.44 MB

english, 2014

14

Systems consequences of amplicon formation in human breast cancer

Inaki, Koichiro, Menghi, Francesca, Woo, Xing Yi, Wagner, Joel P., Jacques, Pierre-Étienne, Lee, Yi Fang, Shreckengast, Phung Trang, Soon, Wendy WeiJia, Malhotra, Ankit, Teo, Audrey S.M., Hillmer, Axe

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 1.39 MB

english, 2014

15

RSC-dependent constructive and destructive interference between opposing arrays of phased nucleosomes in yeast

Ganguli, Dwaipayan, Chereji, Răzvan V., Iben, James R., Cole, Hope A., Clark, David J.

Journal:

Genome Research

Year:

2014

Language:

english

File:

PDF, 3.25 MB

english, 2014

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