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1

Kalokagathia and the Unity of the Virtues in the Eudemian Ethics

Bonasio, Giulia

Journal:

Year:

2019

Language:

english

File:

PDF, 2.44 MB

english, 2019

2

Molecular Signals of Epigenetic States

Bonasio, R., Tu, S., Reinberg, D.

Journal:

Year:

2010

Language:

english

File:

PDF, 923 KB

english, 2010

3

RNA Binding to CBP Stimulates Histone Acetylation and Transcription

Bose, Daniel A., Donahue, Greg, Reinberg, Danny, Shiekhattar, Ramin, Bonasio, Roberto, Berger, Shelley L.

Journal:

Year:

2017

Language:

english

File:

PDF, 6.14 MB

english, 2017

4

High-Quality Genome Assemblies Reveal Long Non-coding RNAs Expressed in Ant Brains

Shields, Emily J., Sheng, Lihong, Weiner, Amber K., Garcia, Benjamin A., Bonasio, Roberto

Journal:

Year:

2018

Language:

english

File:

PDF, 3.49 MB

english, 2018

5

Regulation of Transcription by Long Noncoding RNAs

Bonasio, Roberto, Shiekhattar, Ramin

Journal:

Annual Review of Genetics

Year:

2014

Language:

english

File:

PDF, 1.09 MB

english, 2014

6

Active and Repressed Chromatin Domains Exhibit Distinct Nucleosome Segregation during DNA Replication

Escobar, Thelma M., Oksuz, Ozgur, Saldaña-Meyer, Ricardo, Descostes, Nicolas, Bonasio, Roberto, Reinberg, Danny

Journal:

Year:

2019

Language:

english

File:

PDF, 4.30 MB

english, 2019

7

DNA Methylation in Social Insects: How Epigenetics Can Control Behavior and Longevity

Yan, Hua, Bonasio, Roberto, Simola, Daniel F., Liebig, Jürgen, Berger, Shelley L., Reinberg, Danny

Journal:

Annual Review of Entomology

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

8

The Pleasures of Reason in Plato, Aristotle, and the Hellenistic Hedonists by James Warren

Bonasio, Giulia

Journal:

Classical World

Year:

2016

File:

PDF, 243 KB

2016

9

10.1038/86373

Rescigno, Maria, Urbano, Matteo, Valzasina, Barbara, Francolini, Maura, Rotta, Gianluca, Bonasio, Roberto, Granucci, Francesca, Kraehenbuhl, Jean-Pierre, Ricciardi-Castagnoli, Paola

Journal:

Nature Immunology

Year:

2001

Language:

english

File:

PDF, 929 KB

english, 2001

10

SFMBT1 functions with LSD1 to regulate expression of canonical histone genes and chromatin-related factors

Zhang, J., Bonasio, R., Strino, F., Kluger, Y., Holloway, J. K., Modzelewski, A. J., Cohen, P. E., Reinberg, D.

Journal:

Genes & Development

Year:

2013

Language:

english

File:

PDF, 2.47 MB

english, 2013

11

Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH

Torre, Eduardo, Dueck, Hannah, Shaffer, Sydney, Gospocic, Janko, Gupte, Rohit, Bonasio, Roberto, Kim, Junhyong, Murray, John, Raj, Arjun

Journal:

Year:

2018

Language:

english

File:

PDF, 2.94 MB

english, 2018

12

Social reprogramming in ants induces longevity-associated glia remodeling

Sheng, Lihong, Shields, Emily J., Gospocic, Janko, Glastad, Karl M., Ratchasanmuang, Puttachai, Berger, Shelley L., Raj, Arjun, Little, Shawn, Bonasio, Roberto

Journal:

Science Advances

Year:

2020

File:

PDF, 1.33 MB

2020

13

Eusocial insects as emerging models for behavioural epigenetics

Yan, Hua, Simola, Daniel F., Bonasio, Roberto, Liebig, Jürgen, Berger, Shelley L., Reinberg, Danny

Journal:

Nature Reviews Genetics

Year:

2014

Language:

english

File:

PDF, 2.54 MB

english, 2014

14

Elimination In Vivo of Developing T Cells by Natural Killer Cells

Schott, E., Bonasio, R., Ploegh, H. L.

Journal:

Journal of Experimental Medicine

Year:

2003

Language:

english

File:

PDF, 450 KB

english, 2003

15

Generation, migration and function of circulating dendritic cells

Roberto Bonasio, Ulrich H von Andrian

Journal:

Current Opinion in Immunology

Year:

2006

Language:

english

File:

PDF, 252 KB

english, 2006

16

The role of chromatin and epigenetics in the polyphenisms of ant castes

Journal:

Briefings in Functional Genomics

Year:

2014

Language:

english

File:

PDF, 604 KB

english, 2014

17

The expanding epigenetic landscape of non-model organisms

Journal:

Journal of Experimental Biology

Year:

2015

Language:

english

File:

PDF, 739 KB

english, 2015

18

Loss of KLHL6 promotes diffuse large B-cell lymphoma growth and survival by stabilizing the mRNA decay factor roquin2

Choi, Jaewoo, Lee, Kyutae, Ingvarsdottir, Kristin, Bonasio, Roberto, Saraf, Anita, Florens, Laurence, Washburn, Michael P., Tadros, Saber, Green, Michael R., Busino, Luca

Journal:

Nature Cell Biology

Year:

2018

Language:

english

File:

PDF, 3.42 MB

english, 2018

19

Activation of bone marrow–resident memory T cells by circulating, antigen-bearing dendritic cells

Cavanagh, Lois L, Bonasio, Roberto, Mazo, Irina B, Halin, Cornelia, Cheng, Guiying, van der Velden, Adrianus W M, Cariappa, Annaiah, Chase, Catherine, Russell, Paul, Starnbach, Michael N

Journal:

Nature Immunology

Year:

2005

Language:

english

File:

PDF, 490 KB

english, 2005

20

Bone Marrow Is a Major Reservoir and Site of Recruitment for Central Memory CD8+ T Cells

Irina B. Mazo, Marek Honczarenko, Harry Leung, Lois L. Cavanagh, Roberto Bonasio, Wolfgang Weninger, Katharina Engelke, Lijun Xia, Rodger P. McEver, Pandelakis A. Koni, Leslie E. Silberstein, Ulrich H

Journal:

Year:

2005

Language:

english

File:

PDF, 583 KB

english, 2005

21

MBT domain proteins in development and disease

Roberto Bonasio, Emilio Lecona, Danny Reinberg

Journal:

Seminars in Cell & Developmental Biology

Year:

2010

Language:

english

File:

PDF, 798 KB

english, 2010

22

The C-Terminal Domain of RNA Polymerase II Is Modified by Site-Specific Methylation

Sims, R. J., Rojas, L. A., Beck, D., Bonasio, R., Schuller, R., Drury, W. J., Eick, D., Reinberg, D.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.34 MB

english, 2011

23

Interactions between JARID2 and Noncoding RNAs Regulate PRC2 Recruitment to Chromatin

Kaneko, Syuzo, Bonasio, Roberto, Saldaña-Meyer, Ricardo, Yoshida, Takahaki, Son, Jinsook, Nishino, Koichiro, Umezawa, Akihiro, Reinberg, Danny

Journal:

Year:

2014

Language:

english

File:

PDF, 1.46 MB

english, 2014

24

Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus

Simola, D. F., Graham, R. J., Brady, C. M., Enzmann, B. L., Desplan, C., Ray, A., Zwiebel, L. J., Bonasio, R., Reinberg, D., Liebig, J., Berger, S. L.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.31 MB

english, 2016

25

High-Resolution Mapping of RNA-Binding Regions in the Nuclear Proteome of Embryonic Stem Cells

He, Chongsheng, Sidoli, Simone, Warneford-Thomson, Robert, Tatomer, Deirdre C., Wilusz, Jeremy E., Garcia, Benjamin A., Bonasio, Roberto

Journal:

Year:

2016

Language:

english

File:

PDF, 2.82 MB

english, 2016

26

Clonal deletion of thymocytes by circulating dendritic cells homing to the thymus

Bonasio, Roberto, Scimone, M Lucila, Schaerli, Patrick, Grabie, Nir, Lichtman, Andrew H, von Andrian, Ulrich H

Journal:

Nature Immunology

Year:

2006

Language:

english

File:

PDF, 538 KB

english, 2006

27

SAVER: gene expression recovery for single-cell RNA sequencing

Huang, Mo, Wang, Jingshu, Torre, Eduardo, Dueck, Hannah, Shaffer, Sydney, Bonasio, Roberto, Murray, John I., Raj, Arjun, Li, Mingyao, Zhang, Nancy R.

Journal:

Year:

2018

Language:

english

File:

PDF, 3.29 MB

english, 2018

28

Disruption of ATRX-RNA interactions uncovers roles in ATRX localization and PRC2 function

Ren, Wenqing, Medeiros, Nicole, Warneford-Thomson, Robert, Wulfridge, Phillip, Yan, Qingqing, Bian, Joyce, Sidoli, Simone, Garcia, Benjamin A., Skordalakes, Emmanuel, Joyce, Eric, Bonasio, Roberto, Sa

Journal:

Nature Communications

Year:

2020

File:

PDF, 2.25 MB

2020

29

Genome-wide and Caste-Specific DNA Methylomes of the Ants Camponotus floridanus and Harpegnathos saltator

Roberto Bonasio, Qiye Li, Jinmin Lian, Navdeep S. Mutti, Lijun Jin, Hongmei Zhao, Pei Zhang, Ping Wen, Hui Xiang, Yun Ding, Zonghui Jin, Steven S. Shen, Zongji Wang, Wen Wang, Jun Wang, Shelley L. Ber

Journal:

Current Biology

Year:

2012

Language:

english

File:

PDF, 635 KB

english, 2012

30

PCGF Homologs, CBX Proteins, and RYBP Define Functionally Distinct PRC1 Family Complexes

Zhonghua Gao, Jin Zhang, Roberto Bonasio, Francesco Strino, Ayana Sawai, Fabio Parisi, Yuval Kluger, Danny Reinberg

Journal:

Year:

2012

Language:

english

File:

PDF, 1.93 MB

english, 2012

31

Functionally distinct roles for TET-oxidized 5-methylcytosine bases in somatic reprogramming to pluripotency

Caldwell, Blake A., Liu, Monica Yun, Prasasya, Rexxi D., Wang, Tong, DeNizio, Jamie E., Leu, N. Adrian, Amoh, Nana Yaa A., Krapp, Christopher, Lan, Yemin, Shields, Emily J., Bonasio, Roberto, Lengner,

Journal:

Year:

2020

File:

PDF, 3.31 MB

2020

32

Nascent RNA interaction keeps PRC2 activity poised and in check

Kaneko, Syuzo, Son, Jinsook, Bonasio, Roberto, Shen, Steven S., Reinberg, Danny

Journal:

Genes & Development

Year:

2014

Language:

english

File:

PDF, 1.54 MB

english, 2014

33

PRC2 binds active promoters and contacts nascent RNAs in embryonic stem cells

Kaneko, Syuzo, Son, Jinsook, Shen, Steven S, Reinberg, Danny, Bonasio, Roberto

Journal:

Nature Structural and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 851 KB

english, 2013

34

Mapping Native R-Loops Genome-wide Using a Targeted Nuclease Approach

Yan, Qingqing, Shields, Emily J., Bonasio, Roberto, Sarma, Kavitha

Journal:

Year:

2019

File:

PDF, 2.54 MB

2019

35

Specialized odorant receptors in social insects that detect cuticular hydrocarbon cues and candidate pheromones

Pask, Gregory M., Slone, Jesse D., Millar, Jocelyn G., Das, Prithwiraj, Moreira, Jardel A., Zhou, Xiaofan, Bello, Jan, Berger, Shelley L., Bonasio, Roberto, Desplan, Claude, Reinberg, Danny, Liebig, J

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 1.13 MB

english, 2017

36

SIRT3 Functions in the Nucleus in the Control of Stress-Related Gene Expression

Iwahara, T., Bonasio, R., Narendra, V., Reinberg, D.

Journal:

Molecular and Cellular Biology

Year:

2012

Language:

english

File:

PDF, 3.55 MB

english, 2012

37

Sample Preparation for Mass Spectrometry-based Identification of RNA-binding Regions

Warneford-Thomson, Robert, He, Chongsheng, Sidoli, Simone, Garcia, Benjamin A., Bonasio, Roberto

Journal:

Journal of Visualized Experiments

Year:

2017

Language:

english

File:

PDF, 611 KB

english, 2017

38

Corrigendum: Clonal deletion of thymocytes by circulating dendritic cells homing to the thymus

Bonasio, Roberto, Scimone, M Lucila, Schaerli, Patrick, Grabie, Nir, Lichtman, Andrew H, von Andrian, Ulrich H

Journal:

Nature Immunology

Year:

2006

Language:

english

File:

PDF, 49 KB

english, 2006

39

RNA exploits an exposed regulatory site to inhibit the enzymatic activity of PRC2

Zhang, Qi, McKenzie, Nicholas J., Warneford-Thomson, Robert, Gail, Emma H., Flanigan, Sarena F., Owen, Brady M., Lauman, Richard, Levina, Vitalina, Garcia, Benjamin A., Schittenhelm, Ralf B., Bonasio,

Journal:

Nature Structural and Molecular Biology

Year:

2019

File:

PDF, 4.80 MB

2019

40

CTCF regulates the human p53 gene through direct interaction with its natural antisense transcript, Wrap53

Saldana-Meyer, R., Gonzalez-Buendia, E., Guerrero, G., Narendra, V., Bonasio, R., Recillas-Targa, F., Reinberg, D.

Journal:

Genes & Development

Year:

2014

Language:

english

File:

PDF, 1.57 MB

english, 2014

41

Chromatin in the Nuclear Landscape

Beck, D. B., Bonasio, R., Kaneko, S., Li, G., Li, G., Margueron, R., Oda, H., Sarma, K., Sims, R. J., Son, J., Trojer, P., Reinberg, D.

Journal:

Cold Spring Harbor Symposia on Quantitative Biology

Year:

2010

Language:

english

File:

PDF, 562 KB

english, 2010

42

A chromatin link to caste identity in the carpenter ant Camponotus floridanus

Simola, D. F., Ye, C., Mutti, N. S., Dolezal, K., Bonasio, R., Liebig, J., Reinberg, D., Berger, S. L.

Journal:

Genome Research

Year:

2013

Language:

english

File:

PDF, 5.31 MB

english, 2013

43

Genomic Comparison of the Ants Camponotus floridanus and Harpegnathos saltator

Bonasio, R., Zhang, G., Ye, C., Mutti, N. S., Fang, X., Qin, N., Donahue, G., Yang, P., Li, Q., Li, C., Zhang, P., Huang, Z., Berger, S. L., Reinberg, D., Wang, J., Liebig, J.

Journal:

Year:

2010

Language:

english

File:

PDF, 228 KB

english, 2010

44

Specific and covalent labeling of a membrane protein with organic fluorochromes and quantum dots

Bonasio, R., Carman, C. V., Kim, E., Sage, P. T., Love, K. R., Mempel, T. R., Springer, T. A., von Andrian, U. H.

Journal:

Proceedings of the National Academy of Sciences

Year:

2007

Language:

english

File:

PDF, 981 KB

english, 2007

45

Polycomb Protein SCML2 Regulates the Cell Cycle by Binding and Modulating CDK/CYCLIN/p21 Complexes

Lecona, Emilio, Rojas, Luis Alejandro, Bonasio, Roberto, Johnston, Andrew, Fernández-Capetillo, Oscar, Reinberg, Danny, Kingston, Robert E.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.62 MB

english, 2013

46

Kalokagathia and the Unity of the Virtues in the Eudemian Ethics

Bonasio, Giulia

Journal:

Year:

2019

File:

PDF, 2.44 MB

2019

47

Emerging topics in epigenetics: ants, brains, and noncoding RNAs

Roberto Bonasio

Journal:

Annals of the New York Academy of Sciences

Year:

2012

Language:

english

File:

PDF, 730 KB

english, 2012

48

TET2 chemically modifies tRNAs and regulates tRNA fragment levels

He, Chongsheng, Bozler, Julianna, Janssen, Kevin A., Wilusz, Jeremy E., Garcia, Benjamin A., Schorn, Andrea J., Bonasio, Roberto

Journal:

Nature Structural and Molecular Biology

Year:

2020

File:

PDF, 7.95 MB

2020

49

Mapping Native R-Loops Genome-wide Using a Targeted Nuclease Approach

Yan, Qingqing, Shields, Emily J., Bonasio, Roberto, Sarma, Kavitha

Journal:

Year:

2019

Language:

english

File:

PDF, 2.54 MB

english, 2019

50

In Vivo Proximity Labeling for the Detection of Protein–Protein and Protein–RNA Interactions

Beck, David B., Narendra, Varun, Drury, William J., Casey, Ryan, Jansen, Pascal W. T. C., Yuan, Zuo-Fei, Garcia, Benjamin A., Vermeulen, Michiel, Bonasio, Roberto

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 1.45 MB

english, 2014

To build up a library is to create a life. It’s never just a random collection of books.

— Carlos María Domínguez

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