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1

The role of signal-processing concepts in genomics and proteomics

P.P. Vaidyanathan, Byung-Jun Yoon

Journal:

Journal of the Franklin Institute

Year:

2004

Language:

english

File:

PDF, 493 KB

english, 2004

2

Reverse-Link Interrogation Range of a UHF MIMO-RFID System in Nakagami- Fading Channels

Do-Yun Kim, Han-Shin Jo, Hyungoo Yoon, Cheol Mun, Byung-Jun Jang, Jong-Gwan Yook

Journal:

IEEE Transactions on Industrial Electronics

Year:

2010

Language:

english

File:

PDF, 404 KB

english, 2010

3

Context-Sensitive Hidden Markov Models for Modeling Long-Range Dependencies in Symbol Sequences

Byung-Jun Yoon, Vaidyanathan, P.P.

Journal:

IEEE Transactions on Signal Processing

Year:

2006

Language:

english

File:

PDF, 831 KB

english, 2006

4

Preparation of carbon fibers with excellent mechanical properties from isotropic pitches

Kim, Byung-Jun, Eom, Youngho, Kato, Osamu, Miyawaki, Jin, Kim, Byoung Chul, Mochida, Isao, Yoon, Seong-Ho

Journal:

Year:

2014

Language:

english

File:

PDF, 1.99 MB

english, 2014

5

Analysis of healthcare service utilization after transport-related injuries by a mixture of hidden Markov models

Esmaili, Nazanin, Piccardi, Massimo, Kruger, Bernie, Girosi, Federico, Yoon, Byung-Jun

Journal:

Year:

2018

Language:

english

File:

PDF, 2.76 MB

english, 2018

6

Enhanced stochastic optimization algorithm for finding effective multi-target therapeutics

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 1.02 MB

english, 2011

7

Comparative analysis of protein interaction networks reveals that conserved pathways are susceptible to HIV-1 interception

Xiaoning Qian, Byung-Jun Yoon

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 533 KB

english, 2011

8

PicXAA-R: Efficient structural alignment of multiple RNA sequences using a greedy approach

Sayed Mohammad Ebrahim Sahraeian, Byung-Jun Yoon

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 600 KB

english, 2011

9

Probabilistic reconstruction of the tumor progression process in gene regulatory networks in the presence of uncertainty

Mohammad Shahrokh Esfahani, Byung-Jun Yoon, Edward R Dougherty

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 508 KB

english, 2011

10

Enhancing the accuracy of HMM-based conserved pathway prediction using global correspondence scores

Xiaoning Qian, Sayed Mohammad Ebrahim Sahraeian, Byung-Jun Yoon

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 298 KB

english, 2011

11

Low-energy ion beam treatment of α-Al2O3(0001) and improvement of photoluminescence of ZnO thin films

Jong-Young Park, Young-Soo No, Byung-Jun Park, Hyun-Woo Lee, Ji-Won Choi, Jin-Sang Kim, Y. Ermakov, Seok-Jin Yoon, Young-Jei Oh, Won-Kook Choi

Journal:

Metals and Materials International

Year:

2004

Language:

english

File:

PDF, 420 KB

english, 2004

12

[IEEE 2012 IEEE International Solid- State Circuits Conference - (ISSCC) - San Francisco, CA, USA (2012.02.19-2012.02.23)] 2012 IEEE International Solid-State Circuits Conference - A 64Gb 533Mb/s DDR interface MLC NAND Flash in sub-20nm technology

Lee, Daeyeal, Chang, Ik Joon, Yoon, Sang-Yong, Jang, Joonsuc, Jang, Dong-Su, Hahn, Wook-Ghee, Park, Jong-Yeol, Kim, Doo-Gon, Yoon, Chiweon, Lim, Bong-Soon, Min, Byung-Jun, Yun, Sung-Won, Lee, Ji-Sang,

Year:

2012

Language:

english

File:

PDF, 284 KB

english, 2012

13

Fast Structural Alignment of RNAs by Optimizing the Adjoining Order of Profile-csHMMs

Byung-Jun Yoon, Vaidyanathan, P.P.

Journal:

IEEE Journal of Selected Topics in Signal Processing

Year:

2008

Language:

english

File:

PDF, 1.11 MB

english, 2008

14

Identification of diagnostic subnetwork markers for cancer in human protein-protein interaction network

Junjie Su, Byung-Jun Yoon, Edward R Dougherty

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 1.24 MB

english, 2010

15

Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach

Ying Wang, Vinayak Brahmakshatriya, Huifeng Zhu, Blanca Lupiani, Sanjay M Reddy, Byung-Jun Yoon, Preethi H Gunaratne, Jong Hwan Kim, Rui Chen, Junjun Wang, Huaijun Zhou

Journal:

Year:

2009

Language:

english

File:

PDF, 1.28 MB

english, 2009

16

Correction: Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach

Ying Wang, Vinayak Brahmakshatriya, Huifeng Zhu, Blanca Lupiani, Sanjay M Reddy, Byung-Jun Yoon, Preethi H Gunaratne, Jong Hwan Kim, Rui Chen, Ashley L Benham, Junjun Wang, Huaijun Zhou

Journal:

Year:

2010

Language:

english

File:

PDF, 222 KB

english, 2010

17

Protective effects of ginseng saponins on 3-nitropropionic acid-induced striatal degeneration in rats

Jong-Hoon Kim, Sunoh Kim, In-Soo Yoon, Jong-Hwan Lee, Byung-Jun Jang, Sang Min Jeong, Jun-Ho Lee, Byung-Hwan Lee, Jin-Soo Han, Sekwan Oh, Hyung-Chun Kim, Tae Kyu Park, Hyewhon Rhim, Seung-Yeol Nah

Journal:

Neuropharmacology

Year:

2005

Language:

english

File:

PDF, 832 KB

english, 2005

18

Synthesis and second-harmonic generation study of DCM-containing polyurethane

Chong-Bok Yoon, Byung-Jun Jung, Hong-Ku Shim

Journal:

Synthetic Metals

Year:

2001

Language:

english

File:

PDF, 98 KB

english, 2001

19

Effects of Reader-to-Reader Interference on the UHF RFID Interrogation Range

Do-Yun Kim, Hyun-Goo Yoon, Byung-Jun Jang, Jong-Gwan Yook

Journal:

IEEE Transactions on Industrial Electronics

Year:

2009

Language:

english

File:

PDF, 515 KB

english, 2009

20

A 0.25-μm 3.0-V 1T1C 32-Mb nonvolatile ferroelectric RAM with address transition detector and current forcing latch sense amplifier scheme

Mun-Kyu Choi, Byung-Gil Jeon, Nakwon Jang, Byung-Jun Min, Yoon-Jong Song, Sung-Yung Lee, Hyun-Ho Kim, Dong-Jin Jung, Heung-Jin Joo, Kinam Kim

Journal:

IEEE Journal of Solid-State Circuits

Year:

2002

Language:

english

File:

PDF, 593 KB

english, 2002

21

Computational identification and analysis of noncoding RNAs - Unearthing the buried treasures in the genorne

Byung-Jun Yoon, Vaidyanathan, P.P.

Journal:

IEEE Signal Processing Magazine

Year:

2007

Language:

english

File:

PDF, 1.03 MB

english, 2007

22

A multirate DSP model for estimation of discrete probability density functions

Byung-Jun Yoon, Vaidyanathan, P.P.

Journal:

IEEE Transactions on Signal Processing

Year:

2005

Language:

english

File:

PDF, 538 KB

english, 2005

23

Adaptive reference update (ARU) algorithm. A stochastic search algorithm for efficient optimization of multi-drug cocktails

Mansuck Kim, Byung-Jun Yoon

Journal:

Year:

2012

Language:

english

File:

PDF, 406 KB

english, 2012

24

Comparative Analysis of Biological Networks: Hidden Markov model and Markov chain-based approach

Yoon, Byung-Jun, Qian, Xiaoning, Sahraeian, Sayed Mohammad Ebrahim

Journal:

IEEE Signal Processing Magazine

Year:

2012

Language:

english

File:

PDF, 799 KB

english, 2012

25

[IEEE 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing - Montreal, Que., Canada (17-21 May 2004)] 2004 IEEE International Conference on Acoustics, Speech, and Signal Processing - Wavelet-based denoising by customized thresholding

Byung-Jun Yoon,, Vaidyanathan, P.P.

Year:

2004

Language:

english

File:

PDF, 445 KB

english, 2004

26

Quantifying the Objective Cost of Uncertainty in Complex Dynamical Systems

Yoon, Byung-Jun, Qian, Xiaoning, Dougherty, Edward R.

Journal:

IEEE Transactions on Signal Processing

Year:

2013

Language:

english

File:

PDF, 1.78 MB

english, 2013

27

Sequence alignment by passing messages

Yoon, Byung-Jun

Journal:

Year:

2014

Language:

english

File:

PDF, 865 KB

english, 2014

28

Analysis of finite-phased arrays of aperture-coupled stacked microstrip antennas

Byung-Jun Jang,, Yong-Kook Lee,, He-Won Moon,, Young-Joong Yoon,, Han-Kyu Park,

Journal:

IEEE Transactions on Antennas and Propagation

Year:

1997

Language:

english

File:

PDF, 134 KB

english, 1997

29

Classifier design given an uncertainty class of feature distributions via regularized maximum likelihood and the incorporation of biological pathway knowledge in steady-state phenotype classification

Shahrokh Esfahani, Mohammad, Knight, Jason, Zollanvari, Amin, Yoon, Byung-Jun, Dougherty, Edward R.

Journal:

Pattern Recognition

Year:

2013

Language:

english

File:

PDF, 710 KB

english, 2013

30

Prognostic Value of CT before Thrombolytic Therapy in Iliofemoral Deep Venous Thrombosis

Roh, Byung-Suk, Park, Ki-Han, Kim, Eun-A, Yoon, Kwon-Ha, Juhng, Seon-Kwan, So, Byung-Jun, Sharafuddin, Melhem J.

Journal:

Journal of Vascular and Interventional Radiology

Year:

2002

Language:

english

File:

PDF, 160 KB

english, 2002

31

[IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP'03) - Hong Kong, China (6-10 April 2003)] 2003 IEEE International Conference on Acoustics, Speech, and Signal Processing, 2003. Proceedings. (ICASSP '03). - Discrete probability density estimation using multirate DSP models

Vaidyanathan, P.P., Byung-Jun Yoon,

Year:

2003

Language:

english

File:

PDF, 276 KB

english, 2003

32

[IEEE 2008 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - Phoenix, AZ, USA (2008.06.8-2008.06.10)] 2008 IEEE International Workshop on Genomic Signal Processing and Statistics - A simple method for finding structurally similar RNAS using two-dimensional discrete convolution

Byung-Jun Yoon,

Year:

2008

Language:

english

File:

PDF, 188 KB

english, 2008

33

[IEEE 2007 European Microwave Conference - Munich, Germany (2007.10.9-2007.10.12)] 2007 European Microwave Conference - Effects of reader interference on the RFID interrogation range

Do-Yun Kim,, Byung-Jun Jang,, Hyun-Goo Yoon,, Jun-Seok Park,, Jong-Gwan Yook,

Year:

2007

Language:

english

File:

PDF, 201 KB

english, 2007

34

The thermotropic liquid crystalline behavior of mesophase pitches with different chemical structures

Lee, Seungwon, Eom, Youngho, Kim, Byung-Jun, Mochida, Isao, Yoon, Seong-Ho, Kim, Byoung Chul

Journal:

Year:

2015

Language:

english

File:

PDF, 1.99 MB

english, 2015

35

[IEEE Conference Record of the Thirty-Eighth Asilomar Conference on Signals, Systems and Computers, 2004. - Pacific Grove, CA, USA (Nov. 7-10, 2004)] Conference Record of the Thirty-Eighth Asilomar Conference on Signals, Systems and Computers, 2004. - HMM with auxiliary memory: a new tool for modeling RNA secondary structures

Byung-Jun Yoon,, Vaidyanathan, P.P.

Year:

2004

Language:

english

File:

PDF, 559 KB

english, 2004

36

[IEEE 2008 3rd International Symposium on Communications, Control and Signal Processing (ISCCSP) - St. Julian's, Malta (2008.03.12-2008.03.14)] 2008 3rd International Symposium on Communications, Control and Signal Processing - Effective annotation of noncoding RNA families using profile context-sensitive HMMs

Byung-Jun Yoon,

Year:

2008

Language:

english

File:

PDF, 636 KB

english, 2008

37

[IEEE International Electron Devices Meeting 1998. Technical Digest - San Francisco, CA, USA (6-9 Dec. 1998)] International Electron Devices Meeting 1998. Technical Digest (Cat. No.98CH36217) - A new DRAM cell technology using merged process with storage node and memory cell contact for 4 Gb DRAM and beyond

Yoon-Soo Chun,, Byung-Jun Park,, Gi-Tae Jeong,, Yoo-Sang Hwang,, Kyu-Hyun Lee,, Hong-Sik Jeong,, Tae-Young Jung,, Kinam Kim,

Year:

1998

Language:

english

File:

PDF, 1.11 MB

english, 1998

38

[IEEE 2013 IEEE Global Conference on Signal and Information Processing (GlobalSIP) - Austin, TX, USA (2013.12.3-2013.12.5)] 2013 IEEE Global Conference on Signal and Information Processing - Finding robust subnetwork markers that improve cross-dataset performance of cancer classification

Khunlertgit, Navadon, Yoon, Byung-Jun

Year:

2013

Language:

english

File:

PDF, 186 KB

english, 2013

39

[IEEE 2011 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - San Antonio, TX, USA (2011.12.4-2011.12.6)] 2011 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - Uncertainty-based essentiality in gene regulatory networks

Qian, Xiaoning, Yoon, Byung-Jun, Dougherty, Edward R.

Year:

2011

Language:

english

File:

PDF, 263 KB

english, 2011

40

[IEEE 2012 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - Washington, DC, USA (2012.12.2-2012.12.4)] Proceedings 2012 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - Fast DNA barcode generating algorithm using Radix Coding method

Nikooienejad, Amir, Metz, Richard, Yoon, Byung-Jun, Johnson, Charles D.

Year:

2012

Language:

english

File:

PDF, 215 KB

english, 2012

41

[IEEE 2002 IEEE International Solid-State Circuits Conference. Digest of Technical Papers (Cat. No.02CH37315) - San Francisco, CA, USA (Feb 3-7, 2002)] 2002 IEEE International Solid-State Circuits Conference. Digest of Technical Papers (Cat. No.02CH37315) - A 0.25μm 3.0V 1T1C 32Mb nonvolatile ferroelectric RAM with address transition detector (ATD) and current forcing latch sense amplifier (CFLSA) scheme

Mun-Kyu Choi,, Byung-Gil Jeon,, Nakwon Jang,, Byung-Jun Min,, Yoon-Jong Song,, Sung-Yung Lee,, Hyun-Ho Kim,, Dong-Jin Jung,, Heung-Jin Joo,, Kinam Kim,

Year:

2002

Language:

english

File:

PDF, 511 KB

english, 2002

42

[IEEE 2006 IEEE International Workshop on Genomic Signal Processing and Statistics - College Station, TX, USA (2006.05.28-2006.05.30)] 2006 IEEE International Workshop on Genomic Signal Processing and Statistics - Modeling and identification of alternative folding in regulatory RNAs using context-sensitive HMMS

Yoon, Byung-Jun, Vaidyanathan, P.

Year:

2006

Language:

english

File:

PDF, 140 KB

english, 2006

43

[IEEE 2007 41st Asilomar conference on Signals, Systems and Computers (ACSSC) - Pacific Grove, CA, USA (2007.11.4-2007.11.7)] 2007 Conference Record of the Forty-First Asilomar Conference on Signals, Systems and Computers - Fast Structural Similarity Search of Noncoding RNAs Based on Matched Filtering of Stem Patterns

Yoon, Byung-Jun, Vaidyanathan, P. P.

Year:

2007

Language:

english

File:

PDF, 2.16 MB

english, 2007

44

[IEEE 2013 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - Houston, TX, USA (2013.11.17-2013.11.19)] 2013 IEEE International Workshop on Genomic Signal Processing and Statistics - Designing experiments for optimal reduction of uncertainty in gene regulatory networks

Dehghannasiri, Roozbeh, Yoon, Byung-Jun, Dougherty, Edward R.

Year:

2013

Language:

english

File:

PDF, 87 KB

english, 2013

45

A Novel Low-Complexity HMM Similarity Measure

Sahraeian, Sayed Mohammad Ebrahim, Yoon, Byung-Jun

Journal:

IEEE Signal Processing Letters

Year:

2011

Language:

english

File:

PDF, 269 KB

english, 2011

46

[IEEE 2011 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - San Antonio, TX, USA (2011.12.4-2011.12.6)] 2011 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - Efficient combinatorial drug optimization through stochastic search

Kim, Mansuck, Yoon, Byung-Jun

Year:

2011

Language:

english

File:

PDF, 560 KB

english, 2011

47

Structural Alignment of RNAs Using Profile-csHMMs and Its Application to RNA Homology Search: Overview and New Results

Yoon, Byung-Jun, Vaidyanathan, P. P.

Journal:

IEEE Transactions on Automatic Control

Year:

2008

Language:

english

File:

PDF, 1.18 MB

english, 2008

48

[IEEE IEEE International Workshop on Biomedical Circuits and Systems, 2004. - Singapore (1-3 Dec. 2004)] IEEE International Workshop on Biomedical Circuits and Systems, 2004. - RNA secondary structure prediction using context-sensitive hidden markov models

Byung-Jun Yoon,, Vaidyanathan, R.P.

Year:

2004

Language:

english

File:

PDF, 792 KB

english, 2004

49

Querying Pathways in Protein Interaction Networks Based on Hidden Markov Models

Qian, Xiaoning, Sze, Sing-Hoi, Yoon, Byung-Jun

Journal:

Journal of Computational Biology

Year:

2009

Language:

english

File:

PDF, 452 KB

english, 2009

50

[IEEE 2011 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - San Antonio, TX, USA (2011.12.4-2011.12.6)] 2011 IEEE International Workshop on Genomic Signal Processing and Statistics (GENSIPS) - Probabilistic consistency transformation for multiple alignment of biological networks

Sahraeian, Sayed Mohammad Ebrahim, Yoon, Byung-Jun

Year:

2011

Language:

english

File:

PDF, 207 KB

english, 2011