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51

Comparative analysis of a genome fragment of an uncultivated mesopelagic crenarchaeote reveals multiple horizontal gene transfers

Purificación López-García, Céline Brochier, David Moreira, Francisco Rodríguez-Valera

Journal:

Environmental Microbiology

Year:

2004

Language:

english

File:

PDF, 528 KB

english, 2004

52

Heterotrophic bacteria, activity and bacterial diversity in two coastal lagoons as detected by culture and 16S rRNA genes PCR amplification and partial sequencing

Susana Benlloch, Francisco Rodríguez-Valera, Silvia G. Acinas, Antonio J. Martínez-Murcia

Journal:

Year:

1996

Language:

english

File:

PDF, 1.03 MB

english, 1996

53

Intra- and Intergenomic Variation of Ribosomal RNA Operons in ConcurrentAlteromonas macleodiiStrains

LÃ³pez-PÃ©rez, Mario, Gonzaga, Aitor, Martin-Cuadrado, Ana-Belen, LÃ³pez-GarcÃa, PurificaciÃ³n, Rodriguez-Valera, Francisco, Kimes, Nikole E.

Journal:

Microbial Ecology

Year:

2013

Language:

english

File:

PDF, 851 KB

english, 2013

54

Comparative genomics of gene-family size in closely related bacteria

Ravindra Pushker, Alex Mira, Francisco Rodríguez-Valera

Journal:

Year:

2004

Language:

english

File:

PDF, 1.17 MB

english, 2004

55

Bacterial diversity in two coastal lagoons deduced from 16S rDNA PCR amplification and partial sequencing

Susana Benlloch, Francisco Rodríguez-Valera, Antonio J. Martinez-Murcia

Journal:

FEMS Microbiology Ecology

Year:

1995

Language:

english

File:

PDF, 1.06 MB

english, 1995

56

Diurnally Entrained Anticipatory Behavior in Archaea

Whitehead, Kenia, Pan, Min, Masumura, Ken-ichi, Bonneau, Richard, Baliga, Nitin S., Rodriguez-Valera, Francisco

Journal:

Year:

2009

Language:

english

File:

PDF, 655 KB

english, 2009

57

High Diversity of the Saliva Microbiome in Batwa Pygmies

Nasidze, Ivan, Li, Jing, Schroeder, Roland, Creasey, Jean L., Li, Mingkun, Stoneking, Mark, Rodríguez-Valera, Francisco

Journal:

Year:

2011

Language:

english

File:

PDF, 895 KB

english, 2011

58

General and Applied Aspects of Halophilic Microorganisms || Some Primary and Secondary Metabolites of Hypersaline Microbial Mats and Associated Sediments

Rodriguez-Valera, Francisco

Year:

1991

Language:

english

File:

PDF, 1.19 MB

english, 1991

59

Isolation and characterization of a N4-like lytic bacteriophage infecting Vibrio splendidus, a pathogen of fish and bivalves

Katharios, Pantelis, Kalatzis, Panos G., Kokkari, Constantina, Sarropoulou, Elena, Middelboe, Mathias, Rodriguez-Valera, Francisco

Journal:

Year:

2017

Language:

english

File:

PDF, 5.42 MB

english, 2017

60

Marine-freshwater prokaryotic transitions require extensive changes in the predicted proteome

Cabello-Yeves, Pedro J., Rodriguez-Valera, Francisco

Journal:

Year:

2019

Language:

english

File:

PDF, 3.90 MB

english, 2019

61

Bacterial diversity in two coastal lagoons deduced from 16S rDNA PCR amplification and partial sequencing

Susana Benlloch, Francisco Rodríguez-Valera, Antonio J. Martinez-Murcia

Journal:

FEMS Microbiology Ecology

Year:

1995

Language:

english

File:

PDF, 1.11 MB

english, 1995

62

Corrigendum: Adapting to environmental changes using specialized paralogs: Trends in Genetics 24 (2008) 154–158

Gabino Sanchez-Perez, Alex Mira, Gábor Nyirő, Lejla Pašić, Francisco Rodriguez-Valera

Journal:

Trends in Genetics

Year:

2008

Language:

english

File:

PDF, 66 KB

english, 2008

63

Metagenomic islands of hyperhalophiles: the case ofSalinibacter ruber

Lejla Pašić, Beltran Rodriguez-Mueller, Ana-Belen Martin-Cuadrado, Alex Mira, Forest Rohwer, Francisco Rodriguez-Valera

Journal:

Year:

2009

Language:

english

File:

PDF, 2.63 MB

english, 2009

64

Encyclopedia of Metagenomics || Obesity and Periodontal Disease

Highlander, Sarah K., Rodriguez-Valera, Francisco, White, Bryan A.

Year:

2015

Language:

english

File:

PDF, 1.09 MB

english, 2015

65

Homologous recombination is involved in the diversity of replacement flexible genomic islands in aquatic prokaryotes

LÃ³pez-PÃ©rez, Mario, Martin-Cuadrado, Ana-Belen, Rodriguez-Valera, Francisco

Journal:

Frontiers in Genetics

Year:

2014

Language:

english

File:

PDF, 2.43 MB

english, 2014

66

Effects of Culture Conditions on Poly(beta-Hydroxybutyric Acid) Production by Haloferax mediterranei.

Lillo, Jose Garcia, Rodriguez-Valera, Francisco

Journal:

Applied and Environmental Microbiology

Year:

1990

Language:

english

File:

PDF, 996 KB

english, 1990

67

Transcriptome analysis of Haloquadratum walsbyi: vanity is but the surface

Bolhuis, Henk, Martín-Cuadrado, Ana Belén, Rosselli, Riccardo, Pašić, Lejla, Rodriguez-Valera, Francisco

Journal:

Year:

2017

Language:

english

File:

PDF, 1.39 MB

english, 2017

68

Not All Particles Are Equal: The Selective Enrichment of Particle-Associated Bacteria from the Mediterranean Sea

López-Pérez, Mario, Kimes, Nikole E., Haro-Moreno, Jose M., Rodriguez-Valera, Francisco

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 3.54 MB

english, 2016

69

Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines

Vavourakis, Charlotte D., Ghai, Rohit, Rodriguez-Valera, Francisco, Sorokin, Dimitry Y., Tringe, Susannah G., Hugenholtz, Philip, Muyzer, Gerard

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 2.26 MB

english, 2016

70

Explaining microbial population genomics through phage predation

Rodriguez-Valera, Francisco, Martín-Cuadrado, Ana-Belén, Rodriguez-Brito, Beltrán, Pasic, Lejla, Thingstad, T. Frede, Rohwer, Forest, Mira, Alex

Journal:

Bioentrepreneur

Year:

2009

File:

PDF, 6.01 MB

2009

71

Properties Of The Plasma Membrane Atpases Of The Halophilic Archaebacteria Haloferax Mediterranei And Haloferax Volcanii

Dane, Michaela, Steinert, Kerstin, Esser, Kordula, Bickel-Sandkötter, Susanne, Rodriguez-Valera, Francisco

Journal:

Zeitschrift für Naturforschung C

Year:

1992

Language:

english

File:

PDF, 9.39 MB

english, 1992

72

Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise

Hou, Shengwei, López-Pérez, Mario, Pfreundt, Ulrike, Belkin, Natalia, Stüber, Kurt, Huettel, Bruno, Reinhardt, Richard, Berman-Frank, Ilana, Rodriguez-Valera, Francisco, Hess, Wolfgang R.

Journal:

The ISME Journal

Year:

2018

Language:

english

File:

PDF, 3.49 MB

english, 2018

73

Metagenomics of the Water Column in the Pristine Upper Course of the Amazon River

Ghai, Rohit, Rodŕíguez-Valera, Francisco, McMahon, Katherine D., Toyama, Danyelle, Rinke, Raquel, Cristina Souza de Oliveira, Tereza, Wagner Garcia, José, Pellon de Miranda, Fernando, Henrique-Silva,

Journal:

Year:

2011

Language:

english

File:

PDF, 654 KB

english, 2011

74

A novel haloarchaeal-related lineage is widely distributed in deep oceanic regions

Purificación López-García, David Moreira, Arantxa López-López, Francisco Rodríguez-Valera

Journal:

Environmental Microbiology

Year:

2001

Language:

english

File:

PDF, 487 KB

english, 2001

75

The genome of the square archaeonHaloquadratum walsbyi: life at the limits of water activity

Henk Bolhuis, Peter Palm, Andy Wende, Michaela Falb, Markus Rampp, Francisco Rodriguez-Valera, Friedhelm Pfeiffer, Dieter Oesterhelt

Journal:

Year:

2006

Language:

english

File:

PDF, 1.97 MB

english, 2006

76

Phylogenetic and Evolutionary Patterns in Microbial Carotenoid Biosynthesis Are Revealed by Comparative Genomics

Klassen, Jonathan L., Rodriguez-Valera, Francisco

Journal:

Year:

2010

Language:

english

File:

PDF, 2.81 MB

english, 2010

77

Assembly of a Marine Viral Metagenome after Physical Fractionation

Brum, Jennifer R., Culley, Alexander I., Steward, Grieg F., Rodriguez-Valera, Francisco

Journal:

Year:

2013

Language:

english

File:

PDF, 3.37 MB

english, 2013

78

Evidence for metaviromic islands in marine phages

Mizuno, Carolina Megumi, Ghai, Rohit, Rodriguez-Valera, Francisco

Journal:

Frontiers in Microbiology

Year:

2014

Language:

english

File:

PDF, 2.87 MB

english, 2014

79

Prokaryotic Population Dynamics and Viral Predation in a Marine Succession Experiment Using Metagenomics

Haro-Moreno, Jose M., Rodriguez-Valera, Francisco, López-Pérez, Mario

Journal:

Frontiers in Microbiology

Year:

2019

File:

PDF, 5.94 MB

2019

80

The Neolithic revolution of bacterial genomes

Alex Mira, Ravindra Pushker, Francisco Rodríguez-Valera

Journal:

Trends in Microbiology

Year:

2006

Language:

english

File:

PDF, 590 KB

english, 2006

81

Isopranylglycerol diethers in non-alkaline evaporitic environments

Pilar Teixidor, Joan O. Grimait, Juan J. Pueyo, Francisco Rodriguez-Valera

Journal:

Geochimica et Cosmochimica Acta

Year:

1993

Language:

english

File:

PDF, 1.30 MB

english, 1993

82

A new class of marine Euryarchaeota group II from the mediterranean deep chlorophyll maximum

Martin-Cuadrado, Ana-Belen, Garcia-Heredia, Inmaculada, Moltó, Aitor Gonzaga, López-Úbeda, Rebeca, Kimes, Nikole, López-García, Purificación, Moreira, David, Rodriguez-Valera, Francisco

Journal:

The ISME Journal

Year:

2015

Language:

english

File:

PDF, 3.82 MB

english, 2015

83

Methanesulfonate (MSA) Catabolic Genes from Marine and Estuarine Bacteria

Henriques, Ana C., De Marco, Paolo, Rodriguez-Valera, Francisco

Journal:

Year:

2015

Language:

english

File:

PDF, 1.12 MB

english, 2015

84

Uncovering a hidden diversity: optimized protocols for the extraction of dsDNA bacteriophages from soil

GÃ¶ller, Pauline C., Haro-Moreno, Jose M., Rodriguez-Valera, Francisco, Loessner, Martin J., GÃ³mez-Sanz, Elena

Journal:

Year:

2020

File:

PDF, 1.57 MB

2020

85

Sequence Diversity in the 16S–23S Intergenic Spacer Region (ISR) of the rRNA Operons in Representatives of theEscherichia coliECOR Collection

Ana I. Antón, Antonio J. Martínez-Murcia, Francisco Rodríguez-Valera

Journal:

Journal of Molecular Evolution

Year:

1998

Language:

english

File:

PDF, 404 KB

english, 1998

86

Comparative analysis of genome fragments of Acidobacteria from deep Mediterranean plankton

Achim Quaiser, Purificación López-García, Yvan Zivanovic, Matthew R. Henn, Francisco Rodriguez-Valera, David Moreira

Journal:

Environmental Microbiology

Year:

2008

Language:

english

File:

PDF, 1.04 MB

english, 2008

87

Explaining microbial population genomics through phage predation

Rodriguez-Valera, Francisco, Martin-Cuadrado, Ana-Belen, Rodriguez-Brito, Beltran, Pašić, Lejla, Thingstad, T. Frede, Rohwer, Forest, Mira, Alex

Journal:

Nature Reviews Microbiology

Year:

2009

Language:

english

File:

PDF, 1.03 MB

english, 2009

88

Halococcus saccharolyticus sp. nov., a New Species of Extremely Halophilic Non-alkaliphilic Cocci

Montero, Carlos G., Ventosa, Antonio, Rodriguez-Valera, Francisco, Kates, Morris, Moldoveanu, Natalia, Ruiz-Berraquero, Francisco

Journal:

Systematic and Applied Microbiology

Year:

1989

Language:

english

File:

PDF, 4.28 MB

english, 1989

89

Metagenomic Comparison of Two Thiomicrospira Lineages Inhabiting Contrasting Deep-Sea Hydrothermal Environments

Brazelton, William J., Baross, John A., Rodriguez-Valera, Francisco

Journal:

Year:

2010

Language:

english

File:

PDF, 747 KB

english, 2010

90

Micro-Mar: a database for dynamic representation of marine microbial biodiversity

Ravindra Pushker, Giuseppe D'Auria, Jose Carlos Alba-Casado, Francisco Rodríguez-Valera

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 459 KB

english, 2005

91

Environmental genomics of "Haloquadratum walsbyi" in a saltern crystallizer indicates a large pool of accessory genes in an otherwise coherent species

Boris A Legault, Arantxa Lopez-Lopez, Jose Carlos Alba-Casado, W Ford Doolittle, Henk Bolhuis, Francisco Rodriguez-Valera, R Thane Papke

Journal:

Year:

2006

Language:

english

File:

PDF, 928 KB

english, 2006

92

Genomes of Planktonic Acidimicrobiales : Widening Horizons for Marine Actinobacteria by Metagenomics

Mizuno, Carolina Megumi, Rodriguez-Valera, Francisco, Ghai, Rohit

Journal:

Year:

2015

Language:

english

File:

PDF, 2.85 MB

english, 2015

93

Networking in microbes: conjugative elements and plasmids in the genus Alteromonas

López-Pérez, Mario, Ramon-Marco, Nieves, Rodriguez-Valera, Francisco

Journal:

Year:

2017

Language:

english

File:

PDF, 2.64 MB

english, 2017

94

The Evolution of a Capacity to Build Supra-Cellular Ropes Enabled Filamentous Cyanobacteria to Colonize Highly Erodible Substrates

Garcia-Pichel, Ferran, Wojciechowski, Martin F., Rodriguez-Valera, Francisco

Journal:

Year:

2009

Language:

english

File:

PDF, 332 KB

english, 2009

95

Ribosomal Multi-Operon Diversity: An Original Perspective on the Genus Aeromonas

Roger, Frédéric, Lamy, Brigitte, Jumas-Bilak, Estelle, Kodjo, Angeli, Marchandin, Hélène, Rodriguez-Valera, Francisco

Journal:

Year:

2012

Language:

english

File:

PDF, 584 KB

english, 2012

96

Description of prokaryotic biodiversity along the salinity gradient of a multipond solar saltern by direct PCR amplification of 16S rDNA

Susana Benlloch, Silvia G. Acinas, A. J. Martínez-Murcia, Francisco Rodríguez-Valera

Journal:

Year:

1996

Language:

english

File:

PDF, 1.57 MB

english, 1996

97

Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea

Brochier-Armanet, Céline, Deschamps, Philippe, López-García, Purificación, Zivanovic, Yvan, Rodríguez-Valera, Francisco, Moreira, David

Journal:

The ISME Journal

Year:

2011

Language:

english

File:

PDF, 7.15 MB

english, 2011

98

Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

Ivars-Martinez, Elena, Martin-Cuadrado, Ana-Belen, D'Auria, Giuseppe, Mira, Alex, Ferriera, Steve, Johnson, Justin, Friedman, Robert, Rodriguez-Valera, Francisco

Journal:

The ISME Journal

Year:

2008

Language:

english

File:

PDF, 671 KB

english, 2008

99

Genomes of “Spiribacter”, a streamlined, successful halophilic bacterium

López-Pérez, Mario, Ghai, Rohit, Leon, Maria, Rodríguez-Olmos, Ángel, Copa-Patiño, José, Soliveri, Juan, Sanchez-Porro, Cristina, Ventosa, Antonio, Rodriguez-Valera, Francisco

Journal:

Year:

2013

Language:

english

File:

PDF, 965 KB

english, 2013

100

Prokaryotic taxonomic and metabolic diversity of an intermediate salinity hypersaline habitat assessed by metagenomics

Fernández, Ana B., Ghai, Rohit, Martin-Cuadrado, Ana-Belen, Sánchez-Porro, Cristina, Rodriguez-Valera, Francisco, Ventosa, Antonio

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 561 KB

english, 2014

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