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1

Diffusion tensor imaging of dolphin brains reveals direct auditory pathway to temporal lobe

Berns, Gregory S., Cook, Peter F., Foxley, Sean, Jbabdi, Saad, Miller, Karla L., Marino, Lori

Journal:

Proceedings Biological Sciences

Year:

2015

Language:

english

File:

PDF, 900 KB

english, 2015

2

The extreme capsule fiber complex in humans and macaque monkeys: a comparative diffusion MRI tractography study

Mars, Rogier B., Foxley, Sean, Verhagen, Lennart, Jbabdi, Saad, Sallet, Jérôme, Noonan, MaryAnn P., Neubert, Franz-Xaver, Andersson, Jesper L., Croxson, Paula L., Dunbar, Robin I. M., Khrapitchev, Ale

Journal:

Brain Structure and Function (Anatomy and Embryology 1891-2006)

Year:

2016

Language:

english

File:

PDF, 1.90 MB

english, 2016

3

Imaging human connectomes at the macroscale

Craddock, R Cameron, Jbabdi, Saad, Yan, Chao-Gan, Vogelstein, Joshua T, Castellanos, F Xavier, Di Martino, Adriana, Kelly, Clare, Heberlein, Keith, Colcombe, Stan, Milham, Michael P

Journal:

Year:

2013

Language:

english

File:

PDF, 2.21 MB

english, 2013

4

Simulation of anisotropic growth of low-grade gliomas using diffusion tensor imaging

Saâd Jbabdi, Emmanuel Mandonnet, Hugues Duffau, Laurent Capelle, Kristin Rae Swanson, Mélanie Pélégrini-Issac, Rémy Guillevin, Habib Benali

Journal:

Magnetic Resonance in Medicine

Year:

2005

Language:

english

File:

PDF, 1.38 MB

english, 2005

5

Identification of large-scale networks in the brain using fMRI

Pierre Bellec, Vincent Perlbarg, Saâd Jbabdi, Mélanie Pélégrini-Issac, Jean-Luc Anton, Julien Doyon, Habib Benali

Journal:

Year:

2006

Language:

english

File:

PDF, 1.12 MB

english, 2006

6

DTI measures in crossing-fibre areas: Increased diffusion anisotropy reveals early white matter alteration in MCI and mild Alzheimer's disease

Gwenaëlle Douaud, Saâd Jbabdi, Timothy E.J. Behrens, Ricarda A. Menke, Achim Gass, Andreas U. Monsch, Anil Rao, Brandon Whitcher, Gordon Kindlmann, Paul M. Matthews, Stephen Smith

Journal:

Year:

2011

Language:

english

File:

PDF, 3.74 MB

english, 2011

7

Continuity, Divergence, and the Evolution of Brain Language Pathways

Rilling, James K., Glasser, Matthew F., Jbabdi, Saad, Andersson, Jesper, Preuss, Todd M.

Journal:

Frontiers in Evolutionary Neuroscience

Year:

2012

Language:

english

File:

PDF, 744 KB

english, 2012

8

Connectivity-based segmentation of the periaqueductal gray matter in human with brainstem optimized diffusion MRI

Ezra, Martyn, Faull, Olivia Kate, Jbabdi, Saad, Pattinson, Kyle Thomas

Journal:

Human Brain Mapping

Year:

2015

Language:

english

File:

PDF, 1019 KB

english, 2015

9

Anesthesia-induced Suppression of Human Dorsal Anterior Insula Responsivity at Loss of Volitional Behavioral Response

Warnaby, Catherine Elizabeth, Seretny, Marta, Ní Mhuircheartaigh, Roísín, Rogers, Richard, Jbabdi, Saad, Sleigh, Jamie, Tracey, Irene

Journal:

Year:

2016

Language:

english

File:

PDF, 1.30 MB

english, 2016

10

Concurrent analysis of white matter bundles and grey matter networks in the chimpanzee

Mars, Rogier B., O’Muircheartaigh, Jonathan, Folloni, Davide, Li, Longchuan, Glasser, Matthew F., Jbabdi, Saad, Bryant, Katherine L.

Journal:

Brain Structure and Function (Anatomy and Embryology 1891-2006)

Year:

2018

Language:

english

File:

PDF, 1.87 MB

english, 2018

11

A spectrum of routing strategies for brain networks

Avena-Koenigsberger, Andrea, Yan, Xiaoran, Kolchinsky, Artemy, van den Heuvel, Martijn, Hagmann, Patric, Sporns, Olaf, Jbabdi, Saad

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 5.80 MB

english, 2019

12

XTRACT - Standardised protocols for automated tractography in the human and macaque brain

Warrington, Shaun, Bryant, Katherine L., Khrapitchev, Alexandr A., Sallet, Jerome, Charquero-Ballester, Marina, Douaud, GwenaÃ«lle, Jbabdi, Saad, Mars, Rogier B., Sotiropoulos, Stamatios N.

Journal:

Year:

2020

File:

PDF, 16.79 MB

2020

13

Modeling the temporal network dynamics of neuronal cultures

Cadena, Jose, Sales, Ana Paula, Lam, Doris, Enright, Heather A., Wheeler, Elizabeth K., Fischer, Nicholas O., Jbabdi, Saad

Journal:

PLoS Computational Biology

Year:

2020

File:

PDF, 6.06 MB

2020

14

Challenges and future directions for representations of functional brain organization

Bijsterbosch, Janine, Harrison, Samuel J., Jbabdi, Saad, Woolrich, Mark, Beckmann, Christian, Smith, Stephen, Duff, Eugene P.

Journal:

Nature Neuroscience

Year:

2020

File:

PDF, 2.01 MB

2020

15

Structural and functional bases for individual differences in motor learning

Valentina Tomassini, Saad Jbabdi, Zsigmond T. Kincses, Rose Bosnell, Gwenaelle Douaud, Carlo Pozzilli, Paul M. Matthews, Heidi Johansen-Berg

Journal:

Human Brain Mapping

Year:

2011

Language:

english

File:

PDF, 666 KB

english, 2011

16

Probabilistic tractography recovers a rostrocaudal trajectory of connectivity variability in the human insular cortex

Leonardo Cerliani, Rajat M. Thomas, Saad Jbabdi, Jeroen C.W. Siero, Luca Nanetti, Alessandro Crippa, Valeria Gazzola, Helen D'Arceuil, Christian Keysers

Journal:

Human Brain Mapping

Year:

2012

Language:

english

File:

PDF, 5.07 MB

english, 2012

17

Model-based analysis of multishell diffusion MR data for tractography: How to get over fitting problems

Saad Jbabdi, Stamatios N. Sotiropoulos, Alexander M. Savio, Manuel Graña, Timothy E. J. Behrens

Journal:

Magnetic Resonance in Medicine

Year:

2012

Language:

english

File:

PDF, 1.84 MB

english, 2012

18

How can a Bayesian approach inform neuroscience?

Jill X. O’Reilly, Saad Jbabdi, Timothy E. J. Behrens

Journal:

European Journal of Neuroscience

Year:

2012

Language:

english

File:

PDF, 1.15 MB

english, 2012

19

[IEEE 2012 IEEE 9th International Symposium on Biomedical Imaging (ISBI 2012) - Barcelona, Spain (2012.05.2-2012.05.5)] 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI) - Modelling fibre fanning in diffusion-weighted MRI

Sotiropoulos, Stamatios N., Behrens, Timothy E., Jbabdi, Saad

Year:

2012

Language:

english

File:

PDF, 750 KB

english, 2012

20

The topographic connectome

Jbabdi, Saad, Sotiropoulos, Stamatios N, Behrens, Timothy E

Journal:

Current Opinion in Neurobiology

Year:

2013

Language:

english

File:

PDF, 1.36 MB

english, 2013

21

Bayesian analysis of neuroimaging data in FSL

Mark W. Woolrich, Saad Jbabdi, Brian Patenaude, Michael Chappell, Salima Makni, Timothy Behrens, Christian Beckmann, Mark Jenkinson, Stephen M. Smith

Journal:

Year:

2009

Language:

english

File:

PDF, 2.61 MB

english, 2009

22

Symmetrical event-related EEG/fMRI information fusion in a variational Bayesian framework

Jean Daunizeau, Christophe Grova, Guillaume Marrelec, Jérémie Mattout, Saad Jbabdi, Mélanie Pélégrini-Issac, Jean-Marc Lina, Habib Benali

Journal:

Year:

2007

Language:

english

File:

PDF, 1.87 MB

english, 2007

23

Determination of the human brainstem respiratory control network and its cortical connections in vivo using functional and structural imaging

Kyle T.S. Pattinson, Georgios D. Mitsis, Ann K. Harvey, Saad Jbabdi, Sharon Dirckx, Stephen D. Mayhew, Richard Rogers, Irene Tracey, Richard G. Wise

Journal:

Year:

2009

Language:

english

File:

PDF, 1.23 MB

english, 2009

24

High resolution diffusion-weighted imaging in fixed human brain using diffusion-weighted steady state free precession

Jennifer A. McNab, Saâd Jbabdi, Sean C.L. Deoni, Gwenaëlle Douaud, Timothy E.J. Behrens, Karla L. Miller

Journal:

Year:

2009

Language:

english

File:

PDF, 3.49 MB

english, 2009

25

In vivo evidence for the selective subcortical degeneration in Huntington's disease

Gwenaëlle Douaud, Timothy E. Behrens, Cyril Poupon, Yann Cointepas, Saâd Jbabdi, Véronique Gaura, Narly Golestani, Pierre Krystkowiak, Christophe Verny, Philippe Damier, Anne-Catherine Bachoud-Lévi, P

Journal:

Year:

2009

Language:

english

File:

PDF, 1.59 MB

english, 2009

26

MRI characteristics of the substantia nigra in Parkinson's disease: A combined quantitative T1 and DTI study

Ricarda A. Menke, Jan Scholz, Karla L. Miller, Sean Deoni, Saad Jbabdi, Paul M. Matthews, Mojtaba Zarei

Journal:

Year:

2009

Language:

english

File:

PDF, 286 KB

english, 2009

27

Crossing fibres in tract-based spatial statistics

Saad Jbabdi, Timothy E.J. Behrens, Stephen M. Smith

Journal:

Year:

2010

Language:

english

File:

PDF, 2.42 MB

english, 2010

28

Connectivity-based segmentation of the substantia nigra in human and its implications in Parkinson's disease

Ricarda A. Menke, Saad Jbabdi, Karla L. Miller, Paul M. Matthews, Mojtaba Zarei

Journal:

Year:

2010

Language:

english

File:

PDF, 953 KB

english, 2010

29

Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner

Karla L. Miller, Charlotte J. Stagg, Gwenaëlle Douaud, Saad Jbabdi, Stephen M. Smith, Timothy E.J. Behrens, Mark Jenkinson, Steven A. Chance, Margaret M. Esiri, Natalie L. Voets, Ned Jenkinson, Tipu Z

Journal:

Year:

2011

Language:

english

File:

PDF, 3.88 MB

english, 2011

30

Diffusion tractography of post-mortem human brains: Optimization and comparison of spin echo and steady-state free precession techniques

Karla L. Miller, Jennifer A. McNab, Saad Jbabdi, Gwenaëlle Douaud

Journal:

Year:

2012

Language:

english

File:

PDF, 4.45 MB

english, 2012

31

Ball and rackets: Inferring fiber fanning from diffusion-weighted MRI

Stamatios N. Sotiropoulos, Timothy E.J. Behrens, Saad Jbabdi

Journal:

Year:

2012

Language:

english

File:

PDF, 2.94 MB

english, 2012

32

The minimal preprocessing pipelines for the Human Connectome Project

Glasser, Matthew F., Sotiropoulos, Stamatios N., Wilson, J. Anthony, Coalson, Timothy S., Fischl, Bruce, Andersson, Jesper L., Xu, Junqian, Jbabdi, Saad, Webster, Matthew, Polimeni, Jonathan R., Van E

Journal:

Year:

2013

Language:

english

File:

PDF, 2.93 MB

english, 2013

33

Comprehensive morphometry of subcortical grey matter structures in early-stage Parkinson's disease

Menke, Ricarda A.L., Szewczyk-Krolikowski, Konrad, Jbabdi, Saad, Jenkinson, Mark, Talbot, Kevin, Mackay, Clare E., Hu, Michele

Journal:

Human Brain Mapping

Year:

2014

Language:

english

File:

PDF, 169 KB

english, 2014

34

Diffusion MRI || Imaging Structure and Function

Year:

2009

Language:

english

File:

PDF, 928 KB

english, 2009

35

Spatially constrained hierarchical parcellation of the brain with resting-state fMRI

Blumensath, Thomas, Jbabdi, Saad, Glasser, Matthew F., Van Essen, David C., Ugurbil, Kamil, Behrens, Timothy E.J., Smith, Stephen M.

Journal:

Year:

2013

Language:

english

File:

PDF, 2.59 MB

english, 2013

36

Advances in diffusion MRI acquisition and processing in the Human Connectome Project

Sotiropoulos, Stamatios N., Jbabdi, Saad, Xu, Junqian, Andersson, Jesper L., Moeller, Steen, Auerbach, Edward J., Glasser, Matthew F., Hernandez, Moises, Sapiro, Guillermo, Jenkinson, Mark, Feinberg,

Journal:

Year:

2013

Language:

english

File:

PDF, 5.33 MB

english, 2013

37

Causal effect of disconnection lesions on interhemispheric functional connectivity in rhesus monkeys

O’Reilly, Jill X., Croxson, Paula L., Jbabdi, Saad, Sallet, Jerome, Noonan, MaryAnn P., Mars, Rogier B., Browning, Philip G.F., Wilson, Charles R. E., Mitchell, Anna S., Miller, Karla L., Rushworth, M

Journal:

Proceedings of the National Academy of Sciences

Year:

2013

Language:

english

File:

PDF, 714 KB

english, 2013

38

MSM: A new flexible framework for Multimodal Surface Matching

Robinson, Emma C., Jbabdi, Saad, Glasser, Matthew F., Andersson, Jesper, Burgess, Gregory C., Harms, Michael P., Smith, Stephen M., Van Essen, David C., Jenkinson, Mark

Journal:

Year:

2014

Language:

english

File:

PDF, 3.24 MB

english, 2014

39

Long-range connectomics

Jbabdi, Saad, Behrens, Timothy E.

Journal:

Annals of the New York Academy of Sciences

Year:

2013

Language:

english

File:

PDF, 907 KB

english, 2013

40

Tractography: Where Do We Go from Here?

Jbabdi, Saad, Johansen-Berg, Heidi

Journal:

Brain Connectivity

Year:

2011

Language:

english

File:

PDF, 833 KB

english, 2011

41

fMRI and sleep correlates of the age-related impairment in motor memory consolidation

Fogel, Stuart M., Albouy, Genevieve, Vien, Catherine, Popovicci, Romana, King, Bradley R., Hoge, Rick, Jbabdi, Saad, Benali, Habib, Karni, Avi, Maquet, Pierre, Carrier, Julie, Doyon, Julien

Journal:

Human Brain Mapping

Year:

2014

Language:

english

File:

PDF, 583 KB

english, 2014

42

[IEEE 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - Vancouver, BC (2008.08.20-2008.08.25)] 2008 30th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - Bayesian model order selection for nonlinear system function expansions

Mitsis, Georgios D., Jbabdi, Saad

Year:

2008

Language:

english

File:

PDF, 206 KB

english, 2008

43

Specialization: the connections have it

Jbabdi, Saad, Behrens, Timothy E J

Journal:

Nature Neuroscience

Year:

2012

Language:

english

File:

PDF, 2.36 MB

english, 2012

44

Heritability of fractional anisotropy in human white matter: A comparison of Human Connectome Project and ENIGMA-DTI data

Kochunov, Peter, Jahanshad, Neda, Marcus, Daniel, Winkler, Anderson, Sprooten, Emma, Nichols, Thomas E., Wright, Susan N., Hong, L. Elliot, Patel, Binish, Behrens, Timothy, Jbabdi, Saad, Andersson, Je

Journal:

Year:

2015

Language:

english

File:

PDF, 3.08 MB

english, 2015

45

Diffusion MRI || Imaging Structure and Function

Year:

2014

Language:

english

File:

PDF, 1.60 MB

english, 2014

46

Brain Systems for Probabilistic and Dynamic Prediction: Computational Specificity and Integration

O'Reilly, Jill X., Jbabdi, Saad, Rushworth, Matthew F. S., Behrens, Timothy E. J., O'Doherty, John P.

Journal:

Year:

2013

Language:

english

File:

PDF, 557 KB

english, 2013

47

Characterization of K-Complexes and Slow Wave Activity in a Neural Mass Model

Weigenand, Arne, Schellenberger Costa, Michael, Ngo, Hong-Viet Victor, Claussen, Jens Christian, Martinetz, Thomas, Jbabdi, Saad

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 592 KB

english, 2014

48

Improving diffusion-weighted imaging of post-mortem human brains: SSFP at 7T

Foxley, Sean, Jbabdi, Saad, Clare, Stuart, Lam, Wilfred, Ansorge, Olaf, Douaud, Gwenaelle, Miller, Karla

Journal:

Year:

2014

Language:

english

File:

PDF, 2.23 MB

english, 2014

49

Measuring macroscopic brain connections in vivo

Jbabdi, Saad, Sotiropoulos, Stamatios N, Haber, Suzanne N, Van Essen, David C, Behrens, Timothy E

Journal:

Nature Neuroscience

Year:

2015

Language:

english

File:

PDF, 2.22 MB

english, 2015

50

Fusion in diffusion MRI for improved fibre orientation estimation: An application to the 3T and 7T data of the human connectome project

Sotiropoulos, Stamatios N., Hernández-Fernández, Moisés, Vu, An T., Andersson, Jesper L., Moeller, Steen, Yacoub, Essa, Lenglet, Christophe, Ugurbil, Kamil, Behrens, Timothy E.J., Jbabdi, Saad

Journal:

Year:

2016

Language:

english

File:

PDF, 2.35 MB

english, 2016