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1

Single-cell glycolytic activity regulates membrane tension and HIV-1 fusion

Coomer, Charles A., Carlon-Andres, Irene, Iliopoulou, Maro, Dustin, Michael L., Compeer, Ewoud B., Compton, Alex A., Padilla-Parra, Sergi, Swanstrom, Ronald

Journal:

Year:

2020

Language:

english

File:

PDF, 9.54 MB

english, 2020

2

Dynamic Interaction of Amphiphysin with N-WASP Regulates Actin Assembly

Hiroshi Yamada, Sergi Padilla-Parra, Sun-Joo Park, Toshiki Itoh, Mathilde Chaineau, Ilaria Monaldi, Ottavio Cremona, Fabio Benfenati, Pietro De Camilli, Maite Coppey-Moisan, Marc Tramier, Kohji Takei

Journal:

Neuroscience Research

Year:

2010

Language:

english

File:

PDF, 71 KB

english, 2010

3

Dual-color fluorescence lifetime correlation spectroscopy to quantify protein–protein interactions in live cell

Sergi Padilla-Parra, Nicolas Audugé, Maïté Coppey-Moisan, Marc Tramier

Journal:

Microscopy Research and Technique

Year:

2011

Language:

english

File:

PDF, 1.15 MB

english, 2011

4

Non fitting based FRET–FLIM analysis approaches applied to quantify protein–protein interactions in live cells

Sergi Padilla-Parra, Nicolas Auduge, Maite Coppey-Moisan, Marc Tramier

Journal:

Biophysical Reviews

Year:

2011

Language:

english

File:

PDF, 463 KB

english, 2011

5

FRET microscopy in the living cell: Different approaches, strengths and weaknesses

Sergi Padilla-Parra, Marc Tramier

Journal:

Year:

2012

Language:

english

File:

PDF, 447 KB

english, 2012

6

Quantitative Comparison of Different Fluorescent Protein Couples for Fast FRET-FLIM Acquisition

Padilla-Parra, Sergi, Audugé, Nicolas, Lalucque, Hervé, Mevel, Jean-Claude, Coppey-Moisan, Maïté, Tramier, Marc

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 495 KB

english, 2009

7

Quantitative FRET Analysis by Fast Acquisition Time Domain FLIM at High Spatial Resolution in Living Cells

Padilla-Parra, Sergi, Audugé, Nicolas, Coppey-Moisan, Maïté, Tramier, Marc

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 801 KB

english, 2008

8

Real-Time Imaging of Retrovirus-Endosome Fusion followed by Release and Trafficking of the Viral Core

Padilla-Parra, Sergi, Marin, Mariana, Kondo, Naoyuki, Melikyan, Gregory B.

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 59 KB

english, 2012

9

In The Quest Of The Best Fluorescent Protein Couple For Quantitative Fret-flim

Padilla-Parra, Sergi, Lalucque, Hervé, Masse, Marie-Jo, Mével, Jean Claude, Audugó, Nicolas, Coppey-Moisan, Maíté, Tramier, Marc

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 93 KB

english, 2009

10

Quantitative TCSPC FRET-FLIM Applied to Donors Exhibiting Multi-Exponential Decays: Spatio-Temporal Interaction Between Calmodulin and the Kv7.2 Potassium Channel in Living Cells

Padilla-Parra, Sergi, las Heras, Gloria de, Fernandez-Orth, Juncal, Lopez-Fernandez, Sonia, Villarroel, Alvaro, Requejo-Isidro, Jose

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 35 KB

english, 2011

11

Fast and Accurate FRET Quantification through Computation of the Minimal Fraction of Donor (mfD) from TCSPC Data

Requejo-Isidro, Jose, Padilla-Parra, Sergi, de las Heras, Gloria, Lopez-Fernandez, Sonia

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 36 KB

english, 2012

12

Time-Resolved Imaging of Endosome Acidification and Single Retrovirus Fusion with Endosomes

Padilla-Parra, Sergi, Matos, Pedro M., Kondo, Naoyuki, Marin, Mariana, Santos, Nuno C., Melikyan, Gregory B.

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 36 KB

english, 2013

13

Pinpointing retrovirus entry sites in cells expressing alternatively spliced receptor isoforms by single virus imaging

Sergi Padilla-Parra,Mariana Marin,Naoyuki Kondo,Gregory B Melikyan

Journal:

Year:

2014

Language:

english

File:

PDF, 1.28 MB

english, 2014

14

Multifaceted Mechanisms of HIV-1 Entry Inhibition by Human -Defensin

Demirkhanyan, L. H., Marin, M., Padilla-Parra, S., Zhan, C., Miyauchi, K., Jean-Baptiste, M., Novitskiy, G., Lu, W., Melikyan, G. B.

Journal:

Journal of Biological Chemistry

Year:

2012

Language:

english

File:

PDF, 5.69 MB

english, 2012

15

Quantitative imaging of endosome acidification and single retrovirus fusion with distinct pools of early endosomes

Padilla-Parra, S., Matos, P. M., Kondo, N., Marin, M., Santos, N. C., Melikyan, G. B.

Journal:

Proceedings of the National Academy of Sciences

Year:

2012

Language:

english

File:

PDF, 778 KB

english, 2012

16

Dynamic Interaction of Amphiphysin with N-WASP Regulates Actin Assembly

Yamada, H., Padilla-Parra, S., Park, S.-J., Itoh, T., Chaineau, M., Monaldi, I., Cremona, O., Benfenati, F., De Camilli, P., Coppey-Moisan, M., Tramier, M., Galli, T., Takei, K.

Journal:

Journal of Biological Chemistry

Year:

2009

Language:

english

File:

PDF, 4.77 MB

english, 2009

17

Repulsive guidance molecule is a structural bridge between neogenin and bone morphogenetic protein

Healey, Eleanor G, Bishop, Benjamin, Elegheert, Jonathan, Bell, Christian H, Padilla-Parra, Sergi, Siebold, Christian

Journal:

Nature Structural and Molecular Biology

Year:

2015

Language:

english

File:

PDF, 3.52 MB

english, 2015

18

Fusion of Mature HIV-1 Particles Leads to Complete Release of a Gag-GFP-Based Content Marker and Raises the Intraviral pH

Padilla-Parra, Sergi, Marin, Mariana, Gahlaut, Nivriti, Suter, Rolf, Kondo, Naoyuki, Melikyan, Gregory B., Liu, Shan-Lu

Journal:

Year:

2013

Language:

english

File:

PDF, 1.96 MB

english, 2013

19

Synchronized Retrovirus Fusion in Cells Expressing Alternative Receptor Isoforms Releases the Viral Core into Distinct Sub-cellular Compartments

Padilla-Parra, Sergi, Marin, Mariana, Kondo, Naoyuki, Melikyan, Gregory B., Emerman, Michael

Journal:

Year:

2012

Language:

english

File:

PDF, 5.46 MB

english, 2012

20

Time-Domain Fluorescence Lifetime Imaging Microscopy: A Quantitative Method to Follow Transient Protein–Protein Interactions in Living Cells

Padilla-Parra, Sergi, Audugé, Nicolas, Tramier, Marc, Coppey-Moisan, Maïté

Journal:

Cold Spring Harbor Protocols

Year:

2015

Language:

english

File:

PDF, 965 KB

english, 2015

21

Lysosome sorting of β-glucocerebrosidase by LIMP-2 is targeted by the mannose 6-phosphate receptor

Zhao, Yuguang, Ren, Jingshan, Padilla-Parra, Sergi, Fry, Elizabeth E., Stuart, David I.

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 2.32 MB

english, 2014

22

Actin Dynamics and HIV-1 Entry

Padilla-Parra, Sergi, Dustin, Michael L.

Journal:

Trends in Molecular Medicine

Year:

2016

Language:

english

File:

PDF, 609 KB

english, 2016

23

Imaging Single Virus Entry and Fusion in Live Cells

Padilla-Parra, S., Marin, M., Melikian, G.B.

Journal:

Microscopy and Microanalysis

Year:

2012

Language:

english

File:

PDF, 554 KB

english, 2012

24

Single Wavelength Excitation Dual Color Flim for Multiplexing Genetically Encoded FRET Biosensors

Demeautis, Claire, Sipieter, François, Roul, Julien, Chapuis, Catherine, Padilla-Parra, Sergi, Riquet, Franck, Tramier, Marc

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 44 KB

english, 2016

25

Defining a Retrovirus Entry Site by Single Particle Tracking

Melikian, Gregory, Padilla-Parra, Sergi, Kondo, Naoyuki, Marin, Mariana

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 34 KB

english, 2015

26

Toremifene interacts with and destabilizes the Ebola virus glycoprotein

Zhao, Yuguang, Ren, Jingshan, Harlos, Karl, Jones, Daniel M., Zeltina, Antra, Bowden, Thomas A., Padilla-Parra, Sergi, Fry, Elizabeth E., Stuart, David I.

Journal:

Year:

2016

Language:

english

File:

PDF, 9.44 MB

english, 2016

27

Structural Basis for Plexin Activation and Regulation

Kong, Youxin, Janssen, Bert J.C., Malinauskas, Tomas, Vangoor, Vamshidhar R., Coles, Charlotte H., Kaufmann, Rainer, Ni, Tao, Gilbert, Robert J.C., Padilla-Parra, Sergi, Pasterkamp, R. Jeroen, Jones,

Journal:

Year:

2016

Language:

english

File:

PDF, 4.29 MB

english, 2016

28

Dynamin-2 Stabilizes the HIV-1 Fusion Pore with a Low Oligomeric State

Jones, Daniel M., Alvarez, Luis A., Nolan, Rory, Ferriz, Margarita, Sainz Urruela, Raquel, Massana-Muñoz, Xènia, Novak-Kotzer, Hila, Dustin, Michael L., Padilla-Parra, Sergi

Journal:

Year:

2017

Language:

english

File:

PDF, 2.70 MB

english, 2017

29

Multiplexing PKA and ERK1&2 kinases FRET biosensors in living cells using single excitation wavelength dual colour FLIM

Demeautis, Claire, Sipieter, François, Roul, Julien, Chapuis, Catherine, Padilla-Parra, Sergi, Riquet, Franck B., Tramier, Marc

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.77 MB

english, 2017

30

Astrocytes Resist HIV-1 Fusion but Engulf Infected Macrophage Material

Russell, Rebecca A., Chojnacki, Jakub, Jones, Daniel M., Johnson, Errin, Do, Thao, Eggeling, Christian, Padilla-Parra, Sergi, Sattentau, Quentin J.

Journal:

Year:

2017

Language:

english

File:

PDF, 3.53 MB

english, 2017

31

Well-Characterised Time-Gated Detector Photon Flux Resolves the Ultrastructure of DNA-Damage Nuclear Bodies with G-STED Nanoscopy

Chan, Kok-Lung, Garcia Gonzalez, Esther, Padilla-Parra, Sergi, de la Serna, Jorge Bernardino

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 42 KB

english, 2017

32

Imaging real-time HIV-1 virion fusion with FRET-based biosensors

Jones, Daniel M., Padilla-Parra, Sergi

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 1.41 MB

english, 2015

33

Actomyosin-generated tension on cadherin is similar between dividing and non-dividing epithelial cells in early Xenopus laevis embryos

Herbomel, Gaëtan, Hatte, Guillaume, Roul, Julien, Padilla-Parra, Sergi, Tassan, Jean-Pierre, Tramier, Marc

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.81 MB

english, 2017

34

On the Whereabouts of HIV-1 Cellular Entry and Its Fusion Ports

Jakobsdottir, G. Maria, Iliopoulou, Maro, Nolan, Rory, Alvarez, Luis, Compton, Alex A., Padilla-Parra, Sergi

Journal:

Trends in Molecular Medicine

Year:

2017

Language:

english

File:

PDF, 2.50 MB

english, 2017

35

Detecting protein aggregation and interaction in live cells: A guide to number and brightness

Nolan, Rory, Iliopoulou, Maro, Alvarez, Luis, Padilla-Parra, Sergi

Journal:

Year:

2017

Language:

english

File:

PDF, 635 KB

english, 2017

36

nandb—number and brightness in R with a novel automatic detrending algorithm

Nolan, Rory, Alvarez, Luis A J, Elegheert, Jonathan, Iliopoulou, Maro, Jakobsdottir, G Maria, Rodriguez-Muñoz, Marina, Aricescu, A Radu, Padilla-Parra, Sergi

Journal:

Year:

2017

Language:

english

File:

PDF, 214 KB

english, 2017

37

The β-Lactamase Assay: Harnessing a FRET Biosensor to Analyse Viral Fusion Mechanisms

Jones, Daniel, Padilla-Parra, Sergi

Journal:

Year:

2016

Language:

english

File:

PDF, 1.47 MB

english, 2016

38

Calibration-free In Vitro Quantification of Protein Homo-oligomerization Using Commercial Instrumentation and Free, Open Source Brightness Analysis Software

Nolan, Rory, Alvarez, Luis A., Griffiths, Samuel C., Elegheert, Jonathan, Siebold, Christian, Padilla-Parra, Sergi

Journal:

Journal of Visualized Experiments

Year:

2018

Language:

english

File:

PDF, 839 KB

english, 2018

39

A dynamic three-step mechanism drives the HIV-1 pre-fusion reaction

Iliopoulou, Maro, Nolan, Rory, Alvarez, Luis, Watanabe, Yasunori, Coomer, Charles A., Jakobsdottir, G. Maria, Bowden, Thomas A., Padilla-Parra, Sergi

Journal:

Nature Structural and Molecular Biology

Year:

2018

Language:

english

File:

PDF, 4.69 MB

english, 2018

40

Author Correction: A dynamic three-step mechanism drives the HIV-1 pre-fusion reaction

Iliopoulou, Maro, Nolan, Rory, Alvarez, Luis, Watanabe, Yasunori, Coomer, Charles A., Jakobsdottir, G. Maria, Bowden, Thomas A., Padilla-Parra, Sergi

Journal:

Nature Structural and Molecular Biology

Year:

2019

File:

PDF, 507 KB

2019

41

Chromatin condensation fluctuations rather than steady-state predict chromatin accessibility

Audugé, Nicolas, Padilla-Parra, Sergi, Tramier, Marc, Borghi, Nicolas, Coppey-Moisan, Maïté

Journal:

Nucleic Acids Research

Year:

2019

Language:

english

File:

PDF, 2.85 MB

english, 2019

42

Detrending: How to Correct Images for Bleaching

Nolan, Rory, Alvarez, Luis, Padilla-Parra, Sergi

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 36 KB

english, 2018

43

Detrending: How to Correct Images for Bleaching

Nolan, Rory, Alvarez, Luis, Padilla-Parra, Sergi

Journal:

Biophysical Journal

Year:

2018

File:

PDF, 36 KB

2018

44

Quantitative FRET-FLIM-BlaM to Assess the Extent of HIV-1 Fusion in Live Cells

Carlon-Andres,, Padilla-Parra,

Journal:

Year:

2020

File:

PDF, 1.82 MB

2020

45

Drosophila OTK Is a Glycosaminoglycan-Binding Protein with High Conformational Flexibility

Rozbesky, Daniel, Monistrol, Jim, Jain, Vitul, Hillier, James, Padilla-Parra, Sergi, Jones, E. Yvonne

Journal:

Year:

2020

Language:

english

File:

PDF, 2.69 MB

english, 2020

46

Orthogonal fluorescent chemogenetic reporters for multicolor imaging

Tebo, Alison G., Moeyaert, Benjamien, Thauvin, Marion, Carlon-Andres, Irene, BÃ¶ken, Dorothea, Volovitch, Michel, Padilla-Parra, Sergi, Dedecker, Peter, Vriz, Sophie, Gautier, Arnaud

Journal:

Nature Chemical Biology

Year:

2020

File:

PDF, 7.05 MB

2020

47

Endogenous Labeling for Light Microscopy during HIV-1 Immune Responses

Salmon, Minette, Carlon-Andres, Irene, Padilla-Parra, Sergi

Journal:

Trends in Immunology

Year:

2020

File:

PDF, 3.17 MB

2020