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1

AnnoFly: Annotating Drosophila Embryonic Images Based on an Attention-Enhanced RNN Model

Yang, Yang, Zhou, Mingyu, Fang, Qingwei, Shen, Hong-Bin, Wren, Jonathan

Journal:

Year:

2019

Language:

english

File:

PDF, 704 KB

english, 2019

2

Novel Approach to Resilient Modulus Using Routine Subgrade Soil Properties

Yan, Ke-zhen, Xu, Hong-bin, Shen, Guang-hui

Journal:

International Journal of Geomechanics

Year:

2014

Language:

english

File:

PDF, 1.27 MB

english, 2014

3

Leakage of soluble microbial products from biological activated carbon filtration in drinking water treatment plants and its influence on health risks

Hong, Shen, Xian-chun, Tang, Nan-xiang, Wu, Hong-bin, Chen

Journal:

Year:

2018

Language:

english

File:

PDF, 2.89 MB

english, 2018

4

Hierarchical Hollow Co9S8 Microspheres: Solvothermal Synthesis, Magnetic, Electrochemical, and Electrocatalytic Properties

Dr. Yu-Xue Zhou, Dr. Hong-Bin Yao, Dr. Yi Wang, Hui-Li Liu, Dr. Min-Rui Gao, Prof. Dr. Pei-Kang Shen, Prof. Dr. Shu-Hong Yu

Journal:

Chemistry - A European Journal

Year:

2010

Language:

english

File:

PDF, 666 KB

english, 2010

5

Large-scale plant protein subcellular location prediction

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Journal of Cellular Biochemistry

Year:

2007

Language:

english

File:

PDF, 205 KB

english, 2007

6

Design and implementation of a non-mechanical scanning F-P type laser warning method

Hong-bin Shen, Gang Li, Bing-qi Liu, Han Zhang, Wen-shen Hua, Jian Ma

Journal:

Optoelectronics Letters

Year:

2010

Language:

english

File:

PDF, 241 KB

english, 2010

7

Laser-induced damages to charge coupled device detector using a high-repetition-rate and high-peak-power laser

Li Gang, Shen Hong-bin, Li Li, Zhang Chu, Mao Shao-juan, Wang Yuan-bo

Journal:

Optics & Laser Technology

Year:

2013

Language:

english

File:

PDF, 1.19 MB

english, 2013

8

The effect of endophytic Peyronellaea from heavy metal-contaminated and uncontaminated sites on maize growth, heavy metal absorption and accumulation

Shen, Mi, Liu, Li, Li, Dong-Wei, Zhou, Wen-Na, Zhou, Zuo-Ping, Zhang, Chang-Fei, Luo, Yi-Yong, Wang, Hong-Bin, Li, Hai-Yan

Journal:

Year:

2013

Language:

english

File:

PDF, 759 KB

english, 2013

9

Long-term phosphorus accumulation and agronomic and environmtal critical phosphorus levels in Haplic Luvisol soil, northern China

XI, Bin, ZHAI, Li-mei, LIU, Jian, LIU, Shen, WANG, Hong-yuan, LUO, Chun-yan, REN, Tian-zhi, LIU, Hong-bin

Journal:

Journal of Integrative Agriculture

Year:

2016

Language:

english

File:

PDF, 508 KB

english, 2016

10

A Non-homogeneous Firefly Algorithm and Its Convergence Analysis

Cheung, Ngaam J., Ding, Xue-Ming, Shen, Hong-Bin

Journal:

Journal of Optimization Theory and Applications

Year:

2016

Language:

english

File:

PDF, 831 KB

english, 2016

11

High-power QCW microsecond-pulse solid-state sodium beacon laser with spiking suppression and D_2b re-pumping

Bian, Qi, Bo, Yong, Zuo, Jun-wei, Guo, Chuan, Xu, Chang, Tu, Wei, Shen, Yu, Zong, Nan, Yuan, Lei, Gao, Hong-wei, Peng, Qin-jun, Chen, Hong-bin, Feng, Lu, Jin, Kai, Wei, Kai, Cui, Da-fu, Xue, Sui-jian,

Journal:

Year:

2016

Language:

english

File:

PDF, 1.64 MB

english, 2016

12

Template-based protein structure prediction in CASP11 and retrospect of I-TASSER in the last decade

Yang, Jianyi, Zhang, Wenxuan, He, Baoji, Walker, Sara Elizabeth, Zhang, Hongjiu, Govindarajoo, Brandon, Virtanen, Jouko, Xue, Zhidong, Shen, Hong-Bin, Zhang, Yang

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 963 KB

english, 2015

13

Bioimage-based protein subcellular location prediction: a comprehensive review

Xu, Ying-Ying, Yao, Li-Xiu, Shen, Hong-Bin

Journal:

Frontiers of Computer Science

Year:

2017

Language:

english

File:

PDF, 837 KB

english, 2017

14

MemBrain: An Easy-to-Use Online Webserver for Transmembrane Protein Structure Prediction

Yin, Xi, Yang, Jing, Xiao, Feng, Yang, Yang, Shen, Hong-Bin

Journal:

Nano-Micro Letters

Year:

2018

Language:

english

File:

PDF, 2.30 MB

english, 2018

15

MemBrain-contact 2.0: a new two-stage machine learning model for the prediction enhancement of transmembrane protein residue contacts in the full chain

Yang, Jing, Shen, Hong-Bin

Journal:

Year:

2018

Language:

english

File:

PDF, 290 KB

english, 2018

16

Narrow-Linewidth 100-W-Level Microsecond TEM 00 Nd:YAG Twisted-Mode Laser

Bian, Qi, Zong, Qing-Shuang, Chang, Jin-Quan, Feng, Lu, Bo, Yong, Zuo, Jun-Wei, Shen, Yu, Zong, Nan, Zhang, Shen-Jin, Peng, Qin-Jun, Chen, Hong-Bin, Cui, Da-Fu, Xu, Zu-Yan

Journal:

IEEE Photonics Technology Letters

Year:

2017

Language:

english

File:

PDF, 770 KB

english, 2017

17

Association between the frequency of class II HLA antigens and the susceptibility to intrauterine infection of hepatitis B virus

Xu, Yuan-yong, Yu, Ji-yun, Zhong, Yan-wei, Song, Hong-bin, Liu, Hui-hui, Jia, Lei-li, Li, Shen-long, Xu, Jian-qiu, Li, Qiao

Journal:

International Journal of Biological Sciences

Year:

2008

Language:

english

File:

PDF, 270 KB

english, 2008

18

Recent advances on biopolymer fiber based membranes for lithium-ion battery separators

Zhang, Tian-Wen, Tian, Te, Shen, Bao, Song, Yong-Hui, Yao, Hong-Bin

Journal:

Composites Communications

Year:

2019

Language:

english

File:

PDF, 4.93 MB

english, 2019

19

Recent advances on biopolymer fiber based membranes for lithium-ion battery separators

Zhang, Tian-Wen, Tian, Te, Shen, Bao, Song, Yong-Hui, Yao, Hong-Bin

Journal:

Composites Communications

Year:

2019

File:

PDF, 4.93 MB

2019

20

Artificial intelligence-based multi-objective optimization protocol for protein structure refinement

Wang, Di, Geng, Ling, Zhao, Yu-Jun, Yang, Yang, Huang, Yan, Zhang, Yang, Shen, Hong-Bin, Elofsson, Arne

Journal:

Year:

2019

Language:

english

File:

PDF, 749 KB

english, 2019

21

CRIP: predicting circRNA-RBP interaction sites using a codon-based encoding and hybrid deep neural networks

Zhang, Kaiming, Pan, Xiaoyong, Yang, Yang, Shen, Hong-Bin

Journal:

Year:

2019

Language:

english

File:

PDF, 1.70 MB

english, 2019

22

Ab-initio Membrane Protein Amphipathic Helix Structure Prediction Using Deep Neural Networks

Feng, Shi-Hao, Xia, Chun-Qiu, Zhang, Peidong, Shen, Hong-Bin

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2020

File:

PDF, 2.90 MB

2020

23

Virus-PLoc: A fusion classifier for predicting the subcellular localization of viral proteins within host and virus-infected cells

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Year:

2007

Language:

english

File:

PDF, 150 KB

english, 2007

24

Predicting protein subcellular location by fusing multiple classifiers

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Journal of Cellular Biochemistry

Year:

2006

Language:

english

File:

PDF, 290 KB

english, 2006

25

Improving the accuracy of predicting disulfide connectivity by feature selection

Lin Zhu, Jie Yang, Jiang-Ning Song, Kuo-Chen Chou, Hong-Bin Shen

Journal:

Journal of Computational Chemistry

Year:

2010

Language:

english

File:

PDF, 244 KB

english, 2010

26

IONP-PLL: a novel non-viral vector for efficient gene delivery

Juan-Juan Xiang, Jing-Qun Tang, Shi-Guo Zhu, Xin-Min Nie, Hong-Bin Lu, Shou-Rong Shen, Xiao-Ling Li, Ke Tang, Ming Zhou, Gui-Yuan Li

Journal:

The Journal of Gene Medicine

Year:

2003

Language:

english

File:

PDF, 904 KB

english, 2003

27

Recent progress in protein subcellular location prediction

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Analytical Biochemistry

Year:

2007

Language:

english

File:

PDF, 784 KB

english, 2007

28

PseAAC: A flexible web server for generating various kinds of protein pseudo amino acid composition

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Analytical Biochemistry

Year:

2008

Language:

english

File:

PDF, 112 KB

english, 2008

29

HIVcleave: a web-server for predicting human immunodeficiency virus protease cleavage sites in proteins

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Analytical Biochemistry

Year:

2008

Language:

english

File:

PDF, 438 KB

english, 2008

30

Identification of proteases and their types

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Analytical Biochemistry

Year:

2009

Language:

english

File:

PDF, 363 KB

english, 2009

31

A top-down approach to enhance the power of predicting human protein subcellular localization: Hum-mPLoc 2.0

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Analytical Biochemistry

Year:

2009

Language:

english

File:

PDF, 252 KB

english, 2009

32

Large-scale mining co-expressed genes in Arabidopsis anther: From pair to group

Qing-Ju Jiao, Yan Huang, Hong-Bin Shen

Journal:

Computational Biology and Chemistry

Year:

2011

Language:

english

File:

PDF, 984 KB

english, 2011

33

Predicting protein fold pattern with functional domain and sequential evolution information

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Journal of Theoretical Biology

Year:

2009

Language:

english

File:

PDF, 246 KB

english, 2009

34

Gneg-mPLoc: A top-down strategy to enhance the quality of predicting subcellular localization of Gram-negative bacterial proteins

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Journal of Theoretical Biology

Year:

2010

Language:

english

File:

PDF, 436 KB

english, 2010

35

Phylogeography and Origin of Sheep Breeds in Northern China

Yue-Hui Ma, Shao-Qi Rao, Shen-Jin Lu, Guan-Yu Hou, Wei-Jun Guan, Hong-Bin Li, Xia Li, Qian-Jun Zhao, Jun Guo

Journal:

Conservation Genetics

Year:

2006

Language:

english

File:

PDF, 261 KB

english, 2006

36

Multi Label Learning for Prediction of Human Protein Subcellular Localizations

Lin Zhu, Jie Yang, Hong-Bin Shen

Journal:

The Protein Journal

Year:

2009

Language:

english

File:

PDF, 358 KB

english, 2009

37

Fuzzy KNN for predicting membrane protein types from pseudo-amino acid composition

Hong-Bin Shen, Jie Yang, Kuo-Chen Chou

Journal:

Journal of Theoretical Biology

Year:

2006

Language:

english

File:

PDF, 235 KB

english, 2006

38

Adaptive compressive learning for prediction of protein–protein interactions from primary sequence

Ya-Nan Zhang, Xiao-Yong Pan, Yan Huang, Hong-Bin Shen

Journal:

Journal of Theoretical Biology

Year:

2011

Language:

english

File:

PDF, 429 KB

english, 2011

39

Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

Chou, Kuo-Chen, Shen, Hong-Bin

Journal:

Nature Protocols

Year:

2008

Language:

english

File:

PDF, 716 KB

english, 2008

40

Poly(l-lysine)-modified silica nanoparticles for the delivery of antisense oligonucleotides

Shi-Guo Zhu, Juan-Juan Xiang, Xiao-Ling Li, Shou-Rong Shen, Hong-bin Lu, Jie Zhou, Wei Xiong, Bi-Cheng Zhang, Xin-Min Nie, Ming Zhou, Ke Tang, Gui-Yuan Li

Journal:

Biotechnology and Applied Biochemistry

Year:

2004

Language:

english

File:

PDF, 189 KB

english, 2004

41

Predicting protein-ATP binding sites from primary sequence through fusing bi-profile sampling of multi-view features

Ya-Nan Zhang, Dong-Jun Yu, Shu-Sen Li, Yong-Xian Fan, Yan Huang, Hong-Bin Shen

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 482 KB

english, 2012

42

Ion-Exchange-Assisted Synthesis of Pt-VC Nanoparticles Loaded on Graphitized Carbon: A High-Performance Nanocomposite Electrocatalyst for Oxygen-Reduction Reactions

Guoqiang He, Zaoxue Yan, Dr. Mei Cai, Prof. Dr. Pei Kang Shen, Dr. Min-Rui Gao, Dr. Hong-Bin Yao, Prof. Dr. Shu-Hong Yu

Journal:

Chemistry - A European Journal

Year:

2012

Language:

english

File:

PDF, 1.31 MB

english, 2012

43

SOMPNN: an efficient non-parametric model for predicting transmembrane helices

Yu, Dong-Jun, Shen, Hong-Bin, Yang, Jing-Yu

Journal:

Year:

2012

Language:

english

File:

PDF, 410 KB

english, 2012

44

Gaussian kernel optimization: Complex problem and a simple solution

Jiang-Bo Yin, Tao Li, Hong-Bin Shen

Journal:

Year:

2011

Language:

english

File:

PDF, 743 KB

english, 2011

45

Steric-influenced fluxionality in monomeric two and three coordinate copper(I) complexes with a trans-chelating bis-pyrazole ligand

Chang-Chuan Chou, Hsueh-Ju Liu, Lucas Hung-Chieh Chao, Hong-Bin Syu, Ting-Shen Kuo

Journal:

Year:

2012

Language:

english

File:

PDF, 664 KB

english, 2012

46

Using supervised fuzzy clustering to predict protein structural classes

Hong-Bin Shen, Jie Yang, Xiao-Jun Liu, Kuo-Chen Chou

Journal:

Biochemical and Biophysical Research Communications

Year:

2005

Language:

english

File:

PDF, 560 KB

english, 2005

47

Predicting protein subnuclear location with optimized evidence-theoretic K-nearest classifier and pseudo amino acid composition

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Biochemical and Biophysical Research Communications

Year:

2005

Language:

english

File:

PDF, 205 KB

english, 2005

48

Hum-PLoc: A novel ensemble classifier for predicting human protein subcellular localization

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 219 KB

english, 2006

49

Addendum to “Hum-PLoc: A novel ensemble classifier for predicting human protein subcellular localization” [Biochem. Biophys. Res. Commun. 347 (2006) 150–157]

Kuo-Chen Chou, Hong-Bin Shen

Journal:

Biochemical and Biophysical Research Communications

Year:

2006

Language:

english

File:

PDF, 59 KB

english, 2006

50

Hum-mPLoc: An ensemble classifier for large-scale human protein subcellular location prediction by incorporating samples with multiple sites

Hong-Bin Shen, Kuo-Chen Chou

Journal:

Biochemical and Biophysical Research Communications

Year:

2007

Language:

english

File:

PDF, 239 KB

english, 2007

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