Volume 13; Issue 1

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Plant Methods
Volume 13; Issue 1

Plant Methods

Volume 13; Issue 1

1

Spatially-localized bench-top X-ray scattering reveals tissue-specific microfibril orientation in Moso bamboo

Ahvenainen, Patrik, Dixon, Patrick G., Kallonen, Aki, Suhonen, Heikki, Gibson, Lorna J., Svedström, Kirsi

Journal:

Year:

2017

Language:

english

File:

PDF, 2.88 MB

english, 2017

2

Comparison of three genomic DNA extraction methods to obtain high DNA quality from maize

Abdel-Latif, Amani, Osman, Gamal

Journal:

Year:

2017

Language:

english

File:

PDF, 2.08 MB

english, 2017

3

A high-throughput stereo-imaging system for quantifying rape leaf traits during the seedling stage

Xiong, Xiong, Yu, Lejun, Yang, Wanneng, Liu, Meng, Jiang, Ni, Wu, Di, Chen, Guoxing, Xiong, Lizhong, Liu, Kede, Liu, Qian

Journal:

Year:

2017

Language:

english

File:

PDF, 5.89 MB

english, 2017

4

Application of 3D printing to prototype and develop novel plant tissue culture systems

Shukla, Mukund R., Singh, Amritpal S., Piunno, Kevin, Saxena, Praveen K., Jones, A. Maxwell P.

Journal:

Year:

2017

Language:

english

File:

PDF, 7.30 MB

english, 2017

5

An image analysis pipeline for automated classification of imaging light conditions and for quantification of wheat canopy cover time series in field phenotyping

Yu, Kang, Kirchgessner, Norbert, Grieder, Christoph, Walter, Achim, Hund, Andreas

Journal:

Year:

2017

Language:

english

File:

PDF, 6.11 MB

english, 2017

6

A robust protocol for efficient generation, and genomic characterization of insertional mutants ofChlamydomonas reinhardtii

Pollock, Steve V., Mukherjee, Bratati, Bajsa-Hirschel, Joanna, Machingura, Marylou C., Mukherjee, Ananya, Grossman, Arthur R., Moroney, James V.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.27 MB

english, 2017

7

Improved axenic hydroponic whole plant propagation for rapid production of roots as transformation target tissue

Benzle, Kyle, Cornish, Katrina

Journal:

Year:

2017

Language:

english

File:

PDF, 1.39 MB

english, 2017

8

A novel hairpin library-based approach to identify NBS–LRR genes required for effector-triggered hypersensitive response inNicotiana benthamiana

Brendolise, Cyril, Montefiori, Mirco, Dinis, Romain, Peeters, Nemo, Storey, Roy D., Rikkerink, Erik H.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.60 MB

english, 2017

9

Mid-infrared spectroscopy combined with chemometrics to detect Sclerotinia stem rot on oilseed rape (Brassica napusL.) leaves

Zhang, Chu, Feng, Xuping, Wang, Jian, Liu, Fei, He, Yong, Zhou, Weijun

Journal:

Year:

2017

Language:

english

File:

PDF, 1.59 MB

english, 2017

10

Building a multipurpose insertional mutant library for forward and reverse genetics inChlamydomonas

Cheng, Xi, Liu, Gai, Ke, Wenting, Zhao, Lijuan, Lv, Bo, Ma, Xiaocui, Xu, Nannan, Xia, Xiaoling, Deng, Xuan, Zheng, Chunlei, Huang, Kaiyao

Journal:

Year:

2017

Language:

english

File:

PDF, 5.64 MB

english, 2017

11

High spatio-temporal-resolution detection of chlorophyll fluorescence dynamics from a single chloroplast with confocal imaging fluorometer

Tseng, Yi-Chin, Chu, Shi-Wei

Journal:

Year:

2017

Language:

english

File:

PDF, 6.56 MB

english, 2017

12

Ex vitro hairy root induction in detached peanut leaves for plant–nematode interaction studies

Guimaraes, Larissa Arrais, Pereira, Bruna Medeiros, Araujo, Ana Claudia Guerra, Guimaraes, Patricia Messenberg, Brasileiro, Ana Cristina Miranda

Journal:

Year:

2017

Language:

english

File:

PDF, 1.60 MB

english, 2017

13

Harnessing anthocyanin-rich fruit: a visible reporter for tracing virus-induced gene silencing in pepper fruit

Jihyun Kim,Minkyu Park,Eun Soo Jeong,Je Min Lee,Doil Choi

Journal:

Year:

2017

Language:

english

File:

PDF, 1.70 MB

english, 2017

14

The plant leaf movement analyzer (PALMA): a simple tool for the analysis of periodic cotyledon and leaf movement inArabidopsis thaliana

Lucas Wagner,Christoph Schmal,Dorothee Staiger,Selahattin Danisman

Journal:

Year:

2017

Language:

english

File:

PDF, 2.21 MB

english, 2017

15

Predicting grain yield using canopy hyperspectral reflectance in wheat breeding data

Osval A. Montesinos-López,Abelardo Montesinos-López,José Crossa…

Journal:

Year:

2017

Language:

english

File:

PDF, 3.79 MB

english, 2017

16

The Microphenotron: a robotic miniaturized plant phenotyping platform with diverse applications in chemical biology

Thomas Burrell,Susan Fozard,Geoff H. Holroyd,Andrew P. French…

Journal:

Year:

2017

Language:

english

File:

PDF, 5.84 MB

english, 2017

17

Medical Subject Heading (MeSH) annotations illuminate maize genetics and evolution

Timothy M. Beissinger,Gota Morota

Journal:

Year:

2017

Language:

english

File:

PDF, 868 KB

english, 2017

18

An evaluation of inexpensive methods for root image acquisition when using rhizotrons

Awaz Mohamed,Yogan Monnier,Zhun Mao,Guillaume Lobet,Jean-Luc Maeght…

Journal:

Year:

2017

Language:

english

File:

PDF, 2.29 MB

english, 2017

19

AutoRoot: open-source software employing a novel image analysis approach to support fully-automated plant phenotyping

Michael P. Pound,Susan Fozard,Mercedes Torres Torres,Brian G. Forde…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.71 MB

english, 2017

20

Non-destructive determination of floral staging in cereals using X-ray micro computed tomography (µCT)

Saoirse R. Tracy,José Fernández Gómez,Craig J. Sturrock,Zoe A. Wilson…

Journal:

Year:

2017

Language:

english

File:

PDF, 2.34 MB

english, 2017

21

rosettR: protocol and software for seedling area and growth analysis

Filipa Tomé,Karel Jansseune,Bernadette Saey,Jack Grundy…

Journal:

Year:

2017

Language:

english

File:

PDF, 3.74 MB

english, 2017

22

Development of an efficient glucosinolate extraction method

T. Doheny-Adams,K. Redeker,V. Kittipol,I. Bancroft,S. E. Hartley

Journal:

Year:

2017

Language:

english

File:

PDF, 2.12 MB

english, 2017

23

Growth curve registration for evaluating salinity tolerance in barley

Rui Meng,Stephanie Saade,Sebastian Kurtek,Bettina Berger,Chris Brien…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.81 MB

english, 2017

24

The Tree Drought Emission MONitor (Tree DEMON), an innovative system for assessing biogenic volatile organic compounds emission from plants

Marvin Lüpke,Rainer Steinbrecher,Michael Leuchner,Annette Menzel

Journal:

Year:

2017

Language:

english

File:

PDF, 1.58 MB

english, 2017

25

TALEN-mediated genome-editing approaches in the liverwortMarchantia polymorphayield high efficiencies for targeted mutagenesis

Sarah Kopischke,Esther Schüßler,Felix Althoff,Sabine Zachgo

Journal:

Year:

2017

Language:

english

File:

PDF, 2.23 MB

english, 2017

26

The combination of gas-phase fluorophore technology and automation to enable high-throughput analysis of plant respiration

Andrew P. Scafaro,A. Clarissa A. Negrini,Brendan O’Leary…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.18 MB

english, 2017

27

A new kymogram-based method reveals unexpected effects of marker protein expression and spatial anisotropy of cytoskeletal dynamics in plant cell cortex

Fatima Cvrčková,Denisa Oulehlová

Journal:

Year:

2017

Language:

english

File:

PDF, 2.19 MB

english, 2017

28

TIPS: a system for automated image-based phenotyping of maize tassels

Joseph L. Gage,Nathan D. Miller,Edgar P. Spalding,Shawn M. Kaeppler…

Journal:

Year:

2017

Language:

english

File:

PDF, 3.47 MB

english, 2017

29

A real-time phenotyping framework using machine learning for plant stress severity rating in soybean

Hsiang Sing Naik,Jiaoping Zhang,Alec Lofquist,Teshale Assefa…

Journal:

Year:

2017

Language:

english

File:

PDF, 3.48 MB

english, 2017

30

A nondestructive method to estimate the chlorophyll content ofArabidopsisseedlings

Ying Liang,Daisuke Urano,Kang-Ling Liao,Tyson L. Hedrick,Yajun Gao…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.71 MB

english, 2017

31

A rapid and efficient method for uniform gene expression using the barley stripe mosaic virus

Arnaud Cheuk,Mario Houde

Journal:

Year:

2017

Language:

english

File:

PDF, 4.92 MB

english, 2017

32

Protoplast isolation prior to flow cytometry reveals clear patterns of endoreduplication in potato tubers, related species, and some starchy root crops

F. Parker E. Laimbeer,Sarah H. Holt,Melissa Makris…

Journal:

Year:

2017

Language:

english

File:

PDF, 3.17 MB

english, 2017

33

Reference genes for normalization of qPCR assays in sugarcane plants under water deficit

Larissa Mara de Andrade,Michael dos Santos Brito…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.03 MB

english, 2017

34

Recent achievements obtained by chloroplast transformation

Muhamed Adem,Dereje Beyene,Tileye Feyissa

Journal:

Year:

2017

Language:

english

File:

PDF, 2.06 MB

english, 2017

35

Leucine-rich-repeat-containing variable lymphocyte receptors as modules to target plant-expressed proteins

André C. Velásquez,Kinya Nomura,Max D. Cooper,Brantley R. Herrin…

Journal:

Year:

2017

Language:

english

File:

PDF, 2.72 MB

english, 2017

36

Use of ultrasonication to increase germination rates of Arabidopsis seeds

Ignacio López-Ribera,Carlos M. Vicient

Journal:

Year:

2017

Language:

english

File:

PDF, 1.78 MB

english, 2017

37

In situ measurement of Scots pine needle PRI

Matti Mõttus,Rocío Hernández-Clemente,Viljami Perheentupa…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.02 MB

english, 2017

38

Development of a new heat tolerance assay system for rice spikelet sterility

Makoto Hakata,Hiroshi Wada,Chisato Masumoto-Kubo,Ryo Tanaka…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.47 MB

english, 2017

39

Microscopy ofPhyscomitrella patenssperm cells

Nelly A. Horst,Ralf Reski

Journal:

Year:

2017

Language:

english

File:

PDF, 1.96 MB

english, 2017

40

A method to estimate plant density and plant spacing heterogeneity: application to wheat crops

Shouyang Liu,Fred Baret,Denis Allard,Xiuliang Jin,Bruno Andrieu…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.68 MB

english, 2017

41

Visualization of zinc dynamics in intact plants using positron imaging of commercially available65Zn

Nobuo Suzui,Yong-Gen Yin,Satomi Ishii,Hitoshi Sekimoto,Naoki Kawachi

Journal:

Year:

2017

Language:

english

File:

PDF, 2.20 MB

english, 2017

42

Developing transgenic wheat to encounter rusts and powdery mildew by overexpressing barleychi26gene for fungal resistance

Hala F. Eissa,Sameh E. Hassanien,Ahmed M. Ramadan,Moustafa M. El-Shamy…

Journal:

Year:

2017

Language:

english

File:

PDF, 2.31 MB

english, 2017

43

A fast, efficient chromatin immunoprecipitation method for studying protein-DNA binding inArabidopsismesophyll protoplasts

Jeong Hwan Lee,Suhyun Jin,Sun Young Kim,Wanhui Kim,Ji Hoon Ahn

Journal:

Year:

2017

Language:

english

File:

PDF, 1.72 MB

english, 2017

44

Efficient isolation ofMagnoliaprotoplasts and the application to subcellular localization ofMdeHSF1

Yamei Shen,Dong Meng,Kim McGrouther,Junhong Zhang,Lailiang Cheng

Journal:

Year:

2017

Language:

english

File:

PDF, 2.31 MB

english, 2017

45

Development of high-throughput methods to screen disease caused byRhizoctonia solaniAG 2-1 in oilseed rape

Fryni Drizou,Neil S. Graham,Toby J. A. Bruce,Rumiana V. Ray

Journal:

Year:

2017

Language:

english

File:

PDF, 1.56 MB

english, 2017

46

An efficient protocol for perennial ryegrass mesophyll protoplast isolation and transformation, and its application on interaction study between LpNOL and LpNYC1

Guohui Yu,Qiang Cheng,Zheni Xie,Bin Xu,Bingru Huang,Bingyu Zhao

Journal:

Year:

2017

Language:

english

File:

PDF, 7.96 MB

english, 2017

47

Non-invasive absolute measurement of leaf water content using terahertz quantum cascade lasers

Lorenzo Baldacci,Mario Pagano,Luca Masini,Alessandra Toncelli…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.32 MB

english, 2017

48

Real-time monitoring of PtaHMGB activity in poplar transactivation assays

José M. Ramos-Sánchez,Paolo M. Triozzi,Alicia Moreno-Cortés…

Journal:

Year:

2017

Language:

english

File:

PDF, 2.87 MB

english, 2017

49

A multiplex PCR for rapid identification ofBrassicaspecies in the triangle of U

Joshua C. O. Koh,Denise M. Barbulescu,Sally Norton,Bob Redden…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.34 MB

english, 2017

50

In vivo label-free mapping of the effect of a photosystem II inhibiting herbicide in plants using chlorophyll fluorescence lifetime

Elizabeth Noble,Sunil Kumar,Frederik G. Görlitz,Chris Stain…

Journal:

Year:

2017

Language:

english

File:

PDF, 3.90 MB

english, 2017

51

A comprehensive technique for artificial hybridization in Chickpea (Cicer arietinum)

Shweta Kalve,Million Tadege

Journal:

Year:

2017

Language:

english

File:

PDF, 1.92 MB

english, 2017

52

Improved classification accuracy of powdery mildew infection levels of wine grapes by spatial-spectral analysis of hyperspectral images

Uwe Knauer,Andrea Matros,Tijana Petrovic,Timothy Zanker…

Journal:

Year:

2017

Language:

english

File:

PDF, 3.97 MB

english, 2017

53

A mobile NMR lab for leaf phenotyping in the field

Maja Musse,Laurent Leport,Mireille Cambert,William Debrandt…

Journal:

Year:

2017

Language:

english

File:

PDF, 1.81 MB

english, 2017

54

An improved butanol-HCl assay for quantification of water-soluble, acetone:methanol-soluble, and insoluble proanthocyanidins (condensed tannins)

Shay, Philip-Edouard, Trofymow, J. A., Constabel, C. Peter

Journal:

Year:

2017

Language:

english

File:

PDF, 1.16 MB

english, 2017

55

Hyperspectral image analysis techniques for the detection and classification of the early onset of plant disease and stress

Lowe, Amy, Harrison, Nicola, French, Andrew P

Journal:

Year:

2017

Language:

english

File:

PDF, 1.00 MB

english, 2017

56

Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping

Sadeghi-Tehran, Pouria, Virlet, Nicolas, Sabermanesh, Kasra, Hawkesford, Malcolm J.

Journal:

Year:

2017

Language:

english

File:

PDF, 5.69 MB

english, 2017

57

Acquiring and preprocessing leaf images for automated plant identification: understanding the tradeoff between effort and information gain

Rzanny, Michael, Seeland, Marco, Wäldchen, Jana, Mäder, Patrick

Journal:

Year:

2017

Language:

english

File:

PDF, 1.51 MB

english, 2017

58

Fine-grained recognition of plants from images

Šulc, Milan, Matas, Jiří

Journal:

Year:

2017

Language:

english

File:

PDF, 2.13 MB

english, 2017

59

Panicle-SEG: a robust image segmentation method for rice panicles in the field based on deep learning and superpixel optimization

Xiong, Xiong, Duan, Lingfeng, Liu, Lingbo, Tu, Haifu, Yang, Peng, Wu, Dan, Chen, Guoxing, Xiong, Lizhong, Yang, Wanneng, Liu, Qian

Journal:

Year:

2017

Language:

english

File:

PDF, 3.61 MB

english, 2017

60

Quantification of seed–soil contact of sugar beet (Beta vulgaris) using X-ray Computed Tomography

Blunk, Sebastian, Malik, Ali Hafeez, de Heer, Martine I., Ekblad, Tobias, Bussell, Jennifer, Sparkes, Debbie, Fredlund, Kenneth, Sturrock, Craig J., Mooney, Sacha J.

Journal:

Year:

2017

Language:

english

File:

PDF, 3.84 MB

english, 2017

61

Development of TaqMan probes targeting the four major celiac disease epitopes found in α-gliadin sequences of spelt (Triticum aestivum ssp. spelta) and bread wheat (Triticum aestivum ssp. aestivum)

Dubois, Benjamin, Bertin, Pierre, Muhovski, Yordan, Escarnot, Emmanuelle, Mingeot, Dominique

Journal:

Year:

2017

Language:

english

File:

PDF, 1.50 MB

english, 2017

62

An optimized method for high quality DNA extraction from microalga Prototheca wickerhamii for genome sequencing

Jagielski, Tomasz, Gawor, Jan, Bakuła, Zofia, Zuchniewicz, Karolina, Żak, Iwona, Gromadka, Robert

Journal:

Year:

2017

Language:

english

File:

PDF, 1.14 MB

english, 2017

63

An improved microscale method for extraction of phenolic acids from maize

Zavala-López, Mariana, García-Lara, Silverio

Journal:

Year:

2017

Language:

english

File:

PDF, 1.15 MB

english, 2017

64

A novel 3D imaging system for strawberry phenotyping

He, Joe Q., Harrison, Richard J., Li, Bo

Journal:

Year:

2017

Language:

english

File:

PDF, 1.48 MB

english, 2017

65

Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

Hameed, Muhammad Waqar, Juszczak, Ilona, Bock, Ralph, van Dongen, Joost Thomas

Journal:

Year:

2017

Language:

english

File:

PDF, 2.29 MB

english, 2017

66

Description of olive morphological parameters by using open access software

Blazakis, Konstantinos N., Kosma, Maria, Kostelenos, George, Baldoni, Luciana, Bufacchi, Marina, Kalaitzis, Panagiotis

Journal:

Year:

2017

Language:

english

File:

PDF, 2.60 MB

english, 2017

67

Microscope image based fully automated stomata detection and pore measurement method for grapevines

Jayakody, Hiranya, Liu, Scarlett, Whitty, Mark, Petrie, Paul

Journal:

Year:

2017

Language:

english

File:

PDF, 2.45 MB

english, 2017

68

Correction to: The Tree Drought Emission MONitor (Tree DEMON), an innovative system for assessing biogenic volatile organic compounds emission from plants

Lüpke, Marvin, Steinbrecher, Rainer, Leuchner, Michael, Menzel, Annette

Journal:

Year:

2017

Language:

english

File:

PDF, 1.79 MB

english, 2017

69

A robot-assisted imaging pipeline for tracking the growths of maize ear and silks in a high-throughput phenotyping platform

Brichet, Nicolas, Fournier, Christian, Turc, Olivier, Strauss, Olivier, Artzet, Simon, Pradal, Christophe, Welcker, Claude, Tardieu, François, Cabrera-Bosquet, Llorenç

Journal:

Year:

2017

Language:

english

File:

PDF, 2.05 MB

english, 2017

70

Leaf-GP: an open and automated software application for measuring growth phenotypes for arabidopsis and wheat

Zhou, Ji, Applegate, Christopher, Alonso, Albor Dobon, Reynolds, Daniel, Orford, Simon, Mackiewicz, Michal, Griffiths, Simon, Penfield, Steven, Pullen, Nick

Journal:

Year:

2017

Language:

english

File:

PDF, 5.52 MB

english, 2017

71

Genomic Bayesian functional regression models with interactions for predicting wheat grain yield using hyper-spectral image data

Montesinos-López, Abelardo, Montesinos-López, Osval A., Cuevas, Jaime, Mata-López, Walter A., Burgueño, Juan, Mondal, Sushismita, Huerta, Julio, Singh, Ravi, Autrique, Enrique, González-Pérez, Lorena,

Journal:

Year:

2017

Language:

english

File:

PDF, 3.59 MB

english, 2017

72

Discrimination of boron tolerance in Pisum sativum L. genotypes using a rapid, high-throughput hydroponic screen and precociously germinated seed grown under far-red enriched light

Bennett, Richard G., Ribalta, Federico M., Pazos-Navarro, Maria, Leonforte, Antonio, Croser, Janine S.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.13 MB

english, 2017

73

Histological quantification of maize stem sections from FASGA-stained images

Legland, David, El-Hage, Fadi, Méchin, Valérie, Reymond, Matthieu

Journal:

Year:

2017

Language:

english

File:

PDF, 1.70 MB

english, 2017

74

Surface-enhanced Raman scattering spectra revealing the inter-cultivar differences for Chinese ornamental Flos Chrysanthemum: a new promising method for plant taxonomy

Zhang, Heng, Chen, Zhenyi, Li, Taihao, Chen, Na, Xu, Wenjie, Liu, Shupeng

Journal:

Year:

2017

Language:

english

File:

PDF, 2.42 MB

english, 2017

75

Evaluation of parameters affecting switchgrass tissue culture: toward a consolidated procedure for Agrobacterium-mediated transformation of switchgrass (Panicum virgatum)

Lin, Chien-Yuan, Donohoe, Bryon S., Ahuja, Neha, Garrity, Deborah M., Qu, Rongda, Tucker, Melvin P., Himmel, Michael E., Wei, Hui

Journal:

Year:

2017

Language:

english

File:

PDF, 6.45 MB

english, 2017

76

Establishment of integrated protocols for automated high throughput kinetic chlorophyll fluorescence analyses

Tschiersch, Henning, Junker, Astrid, Meyer, Rhonda C., Altmann, Thomas

Journal:

Year:

2017

Language:

english

File:

PDF, 2.00 MB

english, 2017

77

Quantifying pruning impacts on olive tree architecture and annual canopy growth by using UAV-based 3D modelling

Jiménez-Brenes, F. M., López-Granados, F., de Castro, A. I., Torres-Sánchez, J., Serrano, N., Peña, J. M.

Journal:

Year:

2017

Language:

english

File:

PDF, 5.34 MB

english, 2017

78

Development of a phenotyping platform for high throughput screening of nodal root angle in sorghum

Joshi, Dinesh C., Singh, Vijaya, Hunt, Colleen, Mace, Emma, van Oosterom, Erik, Sulman, Richard, Jordan, David, Hammer, Graeme

Journal:

Year:

2017

Language:

english

File:

PDF, 1.62 MB

english, 2017

79

Accelerating root system phenotyping of seedlings through a computer-assisted processing pipeline

Dupuy, Lionel X., Wright, Gladys, Thompson, Jacqueline A., Taylor, Anna, Dekeyser, Sebastien, White, Christopher P., Thomas, William T. B., Nightingale, Mark, Hammond, John P., Graham, Neil S., Thomas

Journal:

Year:

2017

Language:

english

File:

PDF, 3.01 MB

english, 2017

80

A rapid and efficient in vitro regeneration system for lettuce (Lactuca sativa L.)

Armas, Isabel, Pogrebnyak, Natalia, Raskin, Ilya

Journal:

Year:

2017

Language:

english

File:

PDF, 2.07 MB

english, 2017

81

A procedure for maize genotypes discrimination to drought by chlorophyll fluorescence imaging rapid light curves

de Sousa, Carlos Antônio Ferreira, de Paiva, Dayane Silva, Casari, Raphael Augusto das Chagas Noqueli, de Oliveira, Nelson Geraldo, Molinari, Hugo Bruno Correa, Kobayashi, Adilson Kenji, Magalhães, Pa

Journal:

Year:

2017

Language:

english

File:

PDF, 3.57 MB

english, 2017

82

Elucidating the role of highly homologous Nicotiana benthamiana ubiquitin E2 gene family members in plant immunity through an improved virus-induced gene silencing approach

Zhou, Bangjun, Zeng, Lirong

Journal:

Year:

2017

Language:

english

File:

PDF, 6.52 MB

english, 2017

83

Nano-mechanical characterization of the wood cell wall by AFM studies: comparison between AC- and QI™ mode

Casdorff, Kirstin, Keplinger, Tobias, Burgert, Ingo

Journal:

Year:

2017

Language:

english

File:

PDF, 3.29 MB

english, 2017

84

Quantitation of glutathione S-transferases in rice (Oryza sativa L.) roots exposed to cadmium by liquid chromatography–tandem mass spectrometry using isotope-labeled wing peptides as an internal standard

Cao, Zhenzhen, Mou, Renxiang, Cao, Zhaoyun, Lin, Xiaoyan, Ma, Youning, Zhu, Zhiwei, Chen, Mingxue

Journal:

Year:

2017

Language:

english

File:

PDF, 1.46 MB

english, 2017

85

A high-throughput phenotyping procedure for evaluation of antixenosis against common cutworm at early seedling stage in soybean

Xing, Guangnan, Liu, Kai, Gai, Junyi

Journal:

Year:

2017

Language:

english

File:

PDF, 1.70 MB

english, 2017

86

Ground penetrating radar: a case study for estimating root bulking rate in cassava (Manihot esculenta Crantz)

Delgado, Alfredo, Hays, Dirk B., Bruton, Richard K., Ceballos, Hernán, Novo, Alexandre, Boi, Enrico, Selvaraj, Michael Gomez

Journal:

Year:

2017

Language:

english

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PDF, 1.58 MB

english, 2017

87

An optimised clearing protocol for the quantitative assessment of sub-epidermal ovule tissues within whole cereal pistils

Wilkinson, Laura G., Tucker, Matthew R.

Journal:

Year:

2017

Language:

english

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PDF, 2.47 MB

english, 2017

88

Kinetic modelling: an integrated approach to analyze enzyme activity assays

Boeckx, Jelena, Hertog, Maarten, Geeraerd, Annemie, Nicolai, Bart

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Year:

2017

Language:

english

File:

PDF, 1.20 MB

english, 2017

89

Microaspiration of Solanum tuberosum root cells at early stages of infection by Globodera pallida

Kooliyottil, Rinu, Dandurand, Louise-Marie, Kuhl, Joseph C., Caplan, Allan, Xiao, Fangming

Journal:

Year:

2017

Language:

english

File:

PDF, 1.55 MB

english, 2017

90

Comparison of visible imaging, thermography and spectrometry methods to evaluate the effect of Heterodera schachtii inoculation on sugar beets

Joalland, Samuel, Screpanti, Claudio, Liebisch, Frank, Varella, Hubert Vincent, Gaume, Alain, Walter, Achim

Journal:

Year:

2017

Language:

english

File:

PDF, 1.61 MB

english, 2017

91

TasselNet: counting maize tassels in the wild via local counts regression network

Lu, Hao, Cao, Zhiguo, Xiao, Yang, Zhuang, Bohan, Shen, Chunhua

Journal:

Year:

2017

Language:

english

File:

PDF, 4.16 MB

english, 2017

92

A method for automatic segmentation and splitting of hyperspectral images of raspberry plants collected in field conditions

Williams, Dominic, Britten, Avril, McCallum, Susan, Jones, Hamlyn, Aitkenhead, Matt, Karley, Alison, Loades, Ken, Prashar, Ankush, Graham, Julie

Journal:

Year:

2017

Language:

english

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PDF, 2.45 MB

english, 2017

93

A dual isotopic approach using radioactive phosphorus and the isotopic composition of oxygen associated to phosphorus to understand plant reaction to a change in P nutrition

Pfahler, Verena, Tamburini, Federica, Bernasconi, Stefano M., Frossard, Emmanuel

Journal:

Year:

2017

Language:

english

File:

PDF, 1.35 MB

english, 2017

94

Non-destructive, high-content analysis of wheat grain traits using X-ray micro computed tomography

Hughes, Nathan, Askew, Karen, Scotson, Callum P., Williams, Kevin, Sauze, Colin, Corke, Fiona, Doonan, John H., Nibau, Candida

Journal:

Year:

2017

Language:

english

File:

PDF, 2.36 MB

english, 2017

95

A plant-based chemical genomics screen for the identification of flowering inducers

Fiers, Martijn, Hoogenboom, Jorin, Brunazzi, Alice, Wennekes, Tom, Angenent, Gerco C., Immink, Richard G. H.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.17 MB

english, 2017

96

Detecting spikes of wheat plants using neural networks with Laws texture energy

Qiongyan, Li, Cai, Jinhai, Berger, Bettina, Okamoto, Mamoru, Miklavcic, Stanley J.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.70 MB

english, 2017

97

A sensitive synthetic reporter for visualizing cytokinin signaling output in rice

Tao, Jinyuan, Sun, Huwei, Gu, Pengyuan, Liang, Zhihao, Chen, Xinni, Lou, Jiajing, Xu, Guohua, Zhang, Yali

Journal:

Year:

2017

Language:

english

File:

PDF, 1.13 MB

english, 2017

98

Improved method for genomic DNA extraction for Opuntia Mill. (Cactaceae)

Martínez-González, César Ramiro, Ramírez-Mendoza, Rosario, Jiménez-Ramírez, Jaime, Gallegos-Vázquez, Clemente, Luna-Vega, Isolda

Journal:

Year:

2017

Language:

english

File:

PDF, 1.84 MB

english, 2017

99

A highly efficient ligation-independent cloning system for CRISPR/Cas9 based genome editing in plants

Khan, Aftab A., El-Sayed, Ashraf, Akbar, Asma, Mangravita-Novo, Arianna, Bibi, Shaheen, Afzal, Zunaira, Norman, David J., Ali, Gul Shad

Journal:

Year:

2017

Language:

english

File:

PDF, 1.79 MB

english, 2017

100

Sequence analysis of cultivated strawberry (Fragaria × ananassa Duch.) using microdissected single somatic chromosomes

Yanagi, Tomohiro, Shirasawa, Kenta, Terachi, Mayuko, Isobe, Sachiko

Journal:

Year:

2017

Language:

english

File:

PDF, 1.57 MB

english, 2017

101

Selection and validation of reference genes for RT-qPCR analysis in potato under abiotic stress

Tang, Xun, Zhang, Ning, Si, Huaijun, Calderón-Urrea, Alejandro

Journal:

Year:

2017

Language:

english

File:

PDF, 1.02 MB

english, 2017

102

Rapid in situ 13C tracing of sucrose utilization in Arabidopsis sink and source leaves

Dethloff, Frederik, Orf, Isabel, Kopka, Joachim

Journal:

Year:

2017

Language:

english

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PDF, 1.92 MB

english, 2017

103

Infection of a tomato cell culture by Phytophthora infestans; a versatile tool to study Phytophthora-host interactions

Schoina, Charikleia, Bouwmeester, Klaas, Govers, Francine

Journal:

Year:

2017

Language:

english

File:

PDF, 1.94 MB

english, 2017

104

Integrative field scale phenotyping for investigating metabolic components of water stress within a vineyard

Gago, Jorge, Fernie, Alisdair R., Nikoloski, Zoran, Tohge, Takayuki, Martorell, Sebastiá, Escalona, José Mariano, Ribas-Carbó, Miquel, Flexas, Jaume, Medrano, Hipólito

Journal:

Year:

2017

Language:

english

File:

PDF, 2.09 MB

english, 2017

105

A “Do-It-Yourself” phenotyping system: measuring growth and morphology throughout the diel cycle in rosette shaped plants

Dobrescu, Andrei, Scorza, Livia C. T., Tsaftaris, Sotirios A., McCormick, Alistair J.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.87 MB

english, 2017

106

PYM: a new, affordable, image-based method using a Raspberry Pi to phenotype plant leaf area in a wide diversity of environments

Valle, Benoît, Simonneau, Thierry, Boulord, Romain, Sourd, Francis, Frisson, Thibault, Ryckewaert, Maxime, Hamard, Philippe, Brichet, Nicolas, Dauzat, Myriam, Christophe, Angélique

Journal:

Year:

2017

Language:

english

File:

PDF, 2.57 MB

english, 2017

107

Measuring the compressive modulus of elasticity of pith-filled plant stems

Al-Zube, Loay A., Robertson, Daniel J., Edwards, Jean N., Sun, Wenhuan, Cook, Douglas D.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.15 MB

english, 2017

108

A cautionary note on the use of chromosome conformation capture in plants

Jamge, Suraj, Stam, Maike, Angenent, Gerco C., Immink, Richard G. H.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.66 MB

english, 2017

109

Non-invasive imaging of plant roots in different soils using magnetic resonance imaging (MRI)

Pflugfelder, Daniel, Metzner, Ralf, van Dusschoten, Dagmar, Reichel, Rüdiger, Jahnke, Siegfried, Koller, Robert

Journal:

Year:

2017

Language:

english

File:

PDF, 2.31 MB

english, 2017

110

Reproducible genomic DNA preparation from diverse crop species for molecular genetic applications

Chiong, Kelvin T., Damaj, Mona B., Padilla, Carmen S., Avila, Carlos A., Pant, Shankar R., Mandadi, Kranthi K., Ramos, Ninfa R., Carvalho, Denise V., Mirkov, T. Erik

Journal:

Year:

2017

Language:

english

File:

PDF, 2.12 MB

english, 2017

111

Contrast-enhanced 3D micro-CT of plant tissues using different impregnation techniques

Wang, Zi, Verboven, Pieter, Nicolai, Bart

Journal:

Year:

2017

Language:

english

File:

PDF, 3.59 MB

english, 2017

112

High-throughput detection of antioxidants in mulberry fruit using correlations between high-resolution mass and activity profiles of chromatographic fractions

Park, Ye Ji, Seong, Si Hyun, Kim, Min Sun, Seo, Sang Wan, Kim, Mee Ree, Kim, Hyun Sik

Journal:

Year:

2017

Language:

english

File:

PDF, 1.60 MB

english, 2017

113

Increased accuracy of starch granule type quantification using mixture distributions

Tanaka, Emi, Ral, Jean-Phillippe F., Li, Sean, Gaire, Raj, Cavanagh, Colin R., Cullis, Brian R., Whan, Alex

Journal:

Year:

2017

Language:

english

File:

PDF, 1.08 MB

english, 2017

114

Robust genetic transformation of sorghum (Sorghum bicolor L.) using differentiating embryogenic callus induced from immature embryos

Belide, Srinivas, Vanhercke, Thomas, Petrie, James Robertson, Singh, Surinder Pal

Journal:

Year:

2017

Language:

english

File:

PDF, 2.02 MB

english, 2017

115

A method to generate the surface cell layer of the 3D virtual shoot apex from apical initials

Kucypera, Krzysztof, Lipowczan, Marcin, Piekarska-Stachowiak, Anna, Nakielski, Jerzy

Journal:

Year:

2017

Language:

english

File:

PDF, 3.07 MB

english, 2017

116

Segmentation of 3D images of plant tissues at multiple scales using the level set method

Kiss, Annamária, Moreau, Typhaine, Mirabet, Vincent, Calugaru, Cerasela Iliana, Boudaoud, Arezki, Das, Pradeep

Journal:

Year:

2017

Language:

english

File:

PDF, 2.43 MB

english, 2017

117

An efficient transient expression system for gene function analysis in rose

Lu, Jun, Bai, Mengjuan, Ren, Haoran, Liu, Jinyi, Wang, Changquan

Journal:

Year:

2017

Language:

english

File:

PDF, 2.74 MB

english, 2017