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1

Design and production of new-to-nature antimicrobials by synthetic biology

Kuipers, Oscar P., van Heel, Auke, Mu, Dongdong, Zhou, Liang, Buyvidas, Andrius, Montalbán-López, Manuel

Journal:

New Biotechnology

Year:

2014

Language:

english

File:

PDF, 65 KB

english, 2014

2

Draft Genome Sequences of 10 Paenibacillus and Bacillus sp. Strains Isolated from Healthy Tomato Plants and Rhizosphere Soil

Zhou, Lu, Song, Chunxu, de Jong, Anne, Kuipers, Oscar P., Baltrus, David A.

Journal:

Microbiology Resource Announcements

Year:

2019

Language:

english

File:

PDF, 132 KB

english, 2019

3

Analysis of modular bioengineered antimicrobial lanthipeptides at nanoliter scale

Schmitt, Steven, Montalbán-López, Manuel, Peterhoff, David, Deng, Jingjing, Wagner, Ralf, Held, Martin, Kuipers, Oscar P., Panke, Sven

Journal:

Nature Chemical Biology

Year:

2019

Language:

english

File:

PDF, 1.44 MB

english, 2019

4

Resistance of Gram-positive bacteria to nisin is not determined by Lipid II levels

Naomi E. Kramer, Eddy J. Smid, Jan Kok, Ben de Kruijff, Oscar P. Kuipers, Eefjan Breukink

Journal:

FEMS Microbiology Letters

Year:

2004

Language:

english

File:

PDF, 289 KB

english, 2004

5

Lactic acid bacteria – Genetics, metabolism and application

Willem M. De Vos, Michiel Kleerebezem, Oscar P. Kuipers

Journal:

FEMS Microbiology Reviews

Year:

2005

Language:

english

File:

PDF, 47 KB

english, 2005

6

Biofilm formation and dispersal in Gram-positive bacteria

Tjakko Abee, Ákos T Kovács, Oscar P Kuipers, Stijn van der Veen

Journal:

Current Opinion in Biotechnology

Year:

2011

Language:

english

File:

PDF, 398 KB

english, 2011

7

Natural sweetening of food products by engineering Lactococcus lactis for glucose production

Wietske A. Pool, Ana Rute Neves, Jan Kok, Helena Santos, Oscar P. Kuipers

Journal:

Metabolic Engineering

Year:

2006

Language:

english

File:

PDF, 288 KB

english, 2006

8

Bistability, Epigenetics, and Bet-Hedging in Bacteria

Veening, Jan-Willem, Smits, Wiep Klaas, Kuipers, Oscar P.

Journal:

Annual Review of Microbiology

Year:

2008

Language:

english

File:

PDF, 936 KB

english, 2008

9

Bacterial solutions to multicellularity: a tale of biofilms, filaments and fruiting bodies

Claessen, Dennis, Rozen, Daniel E., Kuipers, Oscar P., Søgaard-Andersen, Lotte, van Wezel, Gilles P.

Journal:

Nature Reviews Microbiology

Year:

2014

Language:

english

File:

PDF, 990 KB

english, 2014

10

Two distinct groups within the Bacillus subtilis group display significantly different spore heat resistance properties

Berendsen, Erwin M., Zwietering, Marcel H., Kuipers, Oscar P., Wells-Bennik, Marjon H.J.

Journal:

Food Microbiology

Year:

2015

Language:

english

File:

PDF, 503 KB

english, 2015

11

Physiological and transcriptional responses of different industrial microbes at near-zero specific growth rates

Ercan, Onur, Bisschops, Markus M. M., Overkamp, Wout, Jørgensen, Thomas R., Ram, Arthur F., Smid, Eddy J., Pronk, Jack T., Kuipers, Oscar P., Daran-Lapujade, Pascale, Kleerebezem, Michiel

Journal:

Applied and Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 3.36 MB

english, 2015

12

Bacteriocins of lactic acid bacteria: extending the family

Alvarez-Sieiro, Patricia, Montalbán-López, Manuel, Mu, Dongdong, Kuipers, Oscar P.

Journal:

Applied Microbiology and Biotechnology

Year:

2016

Language:

english

File:

PDF, 1.72 MB

english, 2016

13

A mobile genetic element profoundly increases heat resistance of bacterial spores

Berendsen, Erwin M, Boekhorst, Jos, Kuipers, Oscar P, Wells-Bennik, Marjon H J

Journal:

The ISME Journal

Year:

2016

Language:

english

File:

PDF, 2.08 MB

english, 2016

14

Draft Whole-Genome Sequences of Three Lactobacillus plantarum Food Isolates: TABLE 1

Fernández Ramírez, Mónica D., Boekhorst, Jos, de Jong, Anne, Kuipers, Oscar P., Abee, Tjakko, Nierop Groot, Masja N.

Journal:

Genome Announcements

Year:

2016

Language:

english

File:

PDF, 139 KB

english, 2016

15

Comparative Transcriptomics of Bacillus mycoides Strains in Response to Potato-Root Exudates Reveals Different Genetic Adaptation of Endophytic and Soil Isolates

Yi, Yanglei, de Jong, Anne, Frenzel, Elrike, Kuipers, Oscar P.

Journal:

Frontiers in Microbiology

Year:

2017

Language:

english

File:

PDF, 4.62 MB

english, 2017

16

Plant-Microbe Interaction: Transcriptional Response of Bacillus Mycoides to Potato Root Exudates

Yi, Yanglei, Li, Zhibo, Kuipers, Oscar P.

Journal:

Journal of Visualized Experiments

Year:

2018

Language:

english

File:

PDF, 516 KB

english, 2018

17

A riboswitch gives rise to multi-generational phenotypic heterogeneity in an auxotrophic bacterium

Hernandez-Valdes, Jhonatan A., van Gestel, Jordi, Kuipers, Oscar P.

Journal:

Nature Communications

Year:

2020

File:

PDF, 2.34 MB

2020

18

Employing lytic phage-mediated horizontal gene transfer in Lactococcus lactis

Marcelli, Barbara, Karsens, Harma, Nijland, Mark, Oudshoorn, Ruben, Kuipers, Oscar P., Kok, Jan, Papadimitriou, Konstantinos

Journal:

Year:

2020

File:

PDF, 2.18 MB

2020

19

Bet hedging or not? A guide to proper classification of microbial survival strategies

Imke G. de Jong, Patsy Haccou, Oscar P. Kuipers

Journal:

Year:

2011

Language:

english

File:

PDF, 303 KB

english, 2011

20

Comparative and functional genomics of lactococci

Jan Kok, Girbe Buist, Aldert L. Zomer, Sacha A.F.T. Van Hijum, Oscar P. Kuipers

Journal:

FEMS Microbiology Reviews

Year:

2005

Language:

english

File:

PDF, 540 KB

english, 2005

21

Genomics and bioinformatics enhance research on food and gut bacteria

Oscar P Kuipers

Journal:

Current Opinion in Biotechnology

Year:

2004

Language:

english

File:

PDF, 67 KB

english, 2004

22

Bacterial spores in food: how phenotypic variability complicates prediction of spore properties and bacterial behavior

Robyn T Eijlander, Tjakko Abee, Oscar P Kuipers

Journal:

Current Opinion in Biotechnology

Year:

2011

Language:

english

File:

PDF, 373 KB

english, 2011

23

Overview on sugar metabolism and its control in Lactococcus lactis– The input from in vivo NMR

Ana Rute Neves, Wietske A. Pool, Jan Kok, Oscar P. Kuipers, Helena Santos

Journal:

FEMS Microbiology Reviews

Year:

2005

Language:

english

File:

PDF, 978 KB

english, 2005

24

Expression systems for industrial Gram-positive bacteria with low guanine and cytosine content

Willem M de Vos, Michiel Kleerebezem, Oscar P Kuipers

Journal:

Current Opinion in Biotechnology

Year:

1997

Language:

english

File:

PDF, 970 KB

english, 1997

25

Genomics for food biotechnology: prospects of the use of high-throughput technologies for the improvement of food microorganisms

Oscar P Kuipers

Journal:

Current Opinion in Biotechnology

Year:

1999

Language:

english

File:

PDF, 93 KB

english, 1999

26

Quorum sensing by peptide pheromones and two-component signal-transduction systems in Gram-positive bacteria

Michiel Kleerebezem, Luis E. N. Quadri, Oscar P. Kuipers, Willem M. De Vos

Journal:

Molecular Microbiology

Year:

1997

Language:

english

File:

PDF, 1.13 MB

english, 1997

27

Transcriptional activation of the glycolytic las operon and catabolite repression of the gal operon in Lactococcus lactis are mediated by the catabolite control protein CcpA

Evert J. Luesink, René E. M. A Van Herpen, Benoît P. Grossiord, Oscar P. Kuipers, Willem M. De Vos

Journal:

Molecular Microbiology

Year:

1998

Language:

english

File:

PDF, 394 KB

english, 1998

28

The extracellular proteome of Bacillus subtilis under secretion stress conditions

Haike Antelmann, Elise Darmon, David Noone, Jan-Willem Veening, Helga Westers, Sierd Bron, Oscar P. Kuipers, Kevin M. Devine, Michael Hecker, Jan Maarten Van Dijl

Journal:

Molecular Microbiology

Year:

2003

Language:

english

File:

PDF, 484 KB

english, 2003

29

Engineering a disulfide bond and free thiols in the lantibiotic nisin Z

Cindy van Kraaij, Eefjan Breukink, Harry S. Rollema, Roger S. Bongers, Hans A. Kosters, Ben de Kruijff, Oscar P. Kuipers

Journal:

Year:

2000

Language:

english

File:

PDF, 714 KB

english, 2000

30

Reviews

Armand Minard, Hermann Berger, Minoru Hara, M. Biardeau, D. Seyfort Ruegg, F. B. J. Kuiper, Oscar Botto, J. W. Jong

Journal:

Indo-Iranian Journal

Year:

1960

File:

PDF, 3.57 MB

1960

31

Protein engineering of lantibiotics

Oscar P. Kuipers, Gabriele Bierbaum, Birgit Ottenwälder, Helen M. Dodd, Nicky Horn, Jörg Metzger, Thomas Kupke, Volker Gnau, Roger Bongers, Patrick Bogaard, Hans Kosters, Harry S. Rollema, Willem M. V

Journal:

Antonie van Leeuwenhoek

Year:

1996

Language:

english

File:

PDF, 821 KB

english, 1996

32

Comparison of lantibiotic gene clusters and encoded proteins

Roland J. Siezen, Oscar P. Kuipers, Willem M. Vos

Journal:

Antonie van Leeuwenhoek

Year:

1996

Language:

english

File:

PDF, 1.12 MB

english, 1996

33

Casitone-mediated expression of theprtPandprtMgenes inLactococcus lactissubsp.lactisBGIS29

Natasa Miladinov, Oscar P. Kuipers, Ljubisa Topisirovic

Journal:

Archives of Microbiology

Year:

2001

Language:

english

File:

PDF, 271 KB

english, 2001

34

The Rotterdam Study: 2012 objectives and design update

Albert Hofman, Cornelia M. van Duijn, Oscar H. Franco, M. Arfan Ikram, Harry L. A. Janssen, Caroline C. W. Klaver, Ernst J. Kuipers, Tamar E. C. Nijsten, Bruno H. Ch. Stricker, Henning Tiemeier, André

Journal:

European Journal of Epidemiology

Year:

2011

Language:

english

File:

PDF, 1.88 MB

english, 2011

35

Understanding microbial behavior within and outside the host to improve food functionality and safety

Tjakko Abee, Oscar P Kuipers

Journal:

Current Opinion in Biotechnology

Year:

2011

Language:

english

File:

PDF, 103 KB

english, 2011

36

Maturation pathway of nisin and other lantibiotics: post-translationally modified antimicrobial peptides exported by Gram-positive bacteria

Willem M. De Vos, Oscar P. Kuipers, Jan Roelof Van Der Meer, Roland J. Siezen

Journal:

Molecular Microbiology

Year:

1995

Language:

english

File:

PDF, 1.25 MB

english, 1995

37

Subcellular sites for bacterial protein export

Nathalie Campo, Harold Tjalsma, Girbe Buist, Dariusz Stepniak, Michel Meijer, Marten Veenhuis, Martin Westermann, Jörg P. Müller, Sierd Bron, Jan Kok, Oscar P. Kuipers, Jan D. H. Jongbloed

Journal:

Molecular Microbiology

Year:

2004

Language:

english

File:

PDF, 853 KB

english, 2004

38

Stripping Bacillus: ComK auto-stimulation is responsible for the bistable response in competence development

Wiep Klaas Smits, Caroline C. Eschevins, Kim A. Susanna, Sierd Bron, Oscar P. Kuipers, Leendert W. Hamoen

Journal:

Molecular Microbiology

Year:

2005

Language:

english

File:

PDF, 277 KB

english, 2005

39

Phosphatases modulate the bistable sporulation gene expression pattern in Bacillus subtilis

Jan-Willem Veening, Leendert W. Hamoen, Oscar P. Kuipers

Journal:

Molecular Microbiology

Year:

2005

Language:

english

File:

PDF, 533 KB

english, 2005

40

LmrCD is a major multidrug resistance transporter in Lactococcus lactis

Jacek Lubelski, Anne De Jong, Ronald Van Merkerk, Herfita Agustiandari, Oscar P. Kuipers, Jan Kok, Arnold J. M. Driessen

Journal:

Molecular Microbiology

Year:

2006

Language:

english

File:

PDF, 314 KB

english, 2006

41

Antirepression as a second mechanism of transcriptional activation by a minor groove binding protein

Wiep Klaas Smits, Tran Thu Hoa, Leendert W. Hamoen, Oscar P. Kuipers, David Dubnau

Journal:

Molecular Microbiology

Year:

2007

Language:

english

File:

PDF, 449 KB

english, 2007

42

Cell envelope stress induced by the bacteriocin Lcn972 is sensed by the lactococcal two-component system CesSR

Beatriz Martínez, Aldert L. Zomer, Ana Rodríguez, Jan Kok, Oscar P. Kuipers

Journal:

Molecular Microbiology

Year:

2007

Language:

english

File:

PDF, 330 KB

english, 2007

43

Temporal separation of distinct differentiation pathways by a dual specificity Rap-Phr system in Bacillus subtilis

Wiep Klaas Smits, Cristina Bongiorni, Jan-Willem Veening, Leendert W. Hamoen, Oscar P. Kuipers, Marta Perego

Journal:

Molecular Microbiology

Year:

2007

Language:

english

File:

PDF, 655 KB

english, 2007

44

The novel transcriptional regulator SczA mediates protection against Zn2+ stress by activation of the Zn2+-resistance gene czcD in Streptococcus pneumoniae

Tomas G. Kloosterman, Magdalena M. Van Der Kooi-Pol, Jetta J. E. Bijlsma, Oscar P. Kuipers

Journal:

Molecular Microbiology

Year:

2007

Language:

english

File:

PDF, 618 KB

english, 2007

45

LysM, a widely distributed protein motif for binding to (peptido)glycans

Girbe Buist, Anton Steen, Jan Kok, Oscar P. Kuipers

Journal:

Molecular Microbiology

Year:

2008

Language:

english

File:

PDF, 300 KB

english, 2008

46

Characterization of the individual glucose uptake systems of Lactococcus lactis: mannose-PTS, cellobiose-PTS and the novel GlcU permease

Rute Castro, Ana R. Neves, Luís L. Fonseca, Wietske A. Pool, Jan Kok, Oscar P. Kuipers, Helena Santos

Journal:

Molecular Microbiology

Year:

2009

Language:

english

File:

PDF, 342 KB

english, 2009

47

How mathematical modelling elucidates signalling in Bacillus subtilis

Ulf W. Liebal, Thomas Millat, Imke G. De Jong, Oscar P. Kuipers, Uwe Völker, Olaf Wolkenhauer

Journal:

Molecular Microbiology

Year:

2010

Language:

english

File:

PDF, 425 KB

english, 2010

48

The cop operon is required for copper homeostasis and contributes to virulence in Streptococcus pneumoniae

Sulman Shafeeq, Hasan Yesilkaya, Tomas G. Kloosterman, Geetha Narayanan, Michal Wandel, Peter W. Andrew, Oscar P. Kuipers, Julie A. Morrissey

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 699 KB

english, 2011

49

Determining sites of interaction between prenisin and its modification enzymes NisB and NisC

Rustem Khusainov, René Heils, Jacek Lubelski, Gert N. Moll, Oscar P. Kuipers

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 1.14 MB

english, 2011

50

Ubiquitous late competence genes in Bacillus species indicate the presence of functional DNA uptake machineries

Ákos T. Kovács, Wiep Klaas Smits, Aleksandra M. Mirończuk, Oscar P. Kuipers

Journal:

Environmental Microbiology

Year:

2009

Language:

english

File:

PDF, 472 KB

english, 2009